Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05750 ATGATGGGTGATGAGAGAGTAGCGAGGCGACAAATTGGTAGGAAAGGAAGTATGGCGCGAATGTGGCTGATGATGGGCAGTGATGGGCAGAGACAGATGGTGGAGGCAGGGAGACAGTTGATAATGCAGCGGACGGGACTAACAGCTAGGGACCTTAGGAATCTTGATCCAATGTTGACCTACCCTTCAACAATTGTAGGGCGTGACAAAGCAATGGTCTTAAACTTGGAACAAATAAAGGCTATCATTACTGCTCATGAGGTTCTTTTGCTCAATTCTAGAGATCCTTCTGTTATCCCTTTTGTTGATGAACTTCATGCAAGGATTATTGATCATCACAGTACTCCTACTACTGATCATTCTCAGGAGGGTCAAAATGGGGAGGATAAAGGTGAAATAAAGAGAGATAGCAGCAACAATATTAAGATTCTTCCGTTTGAATTTGTCGTGTTGGAGGCATGCCTCGAAGCTGTTATTAGTTCCTTAGAAAATGAGGCAAATATATTGGAATTGGAGGCTTTCCCGGCCTTAGATAAGCTAACATCAAAGATTAGTACTCTTAATTTGGAACGCGTTCGTCATATTAAGAGTCGATTGGTTGCCTTAAGTTCTCGTGTTCAAAAGGTAAGGGATGAACTAGAAAACCTGTTGGATGATGATGGAGATATGGCTGAACTATATCTGACTGACAAGTTAGCTAAACAGAAGTTTGAAATATTTTCTGCTGCTTCATCCATGAATAATAACGGAGATGACATGATGACAAATCGAGTTCTTCCACAAGATATAGTCGACAGGACTCATCCTGAAATATCATTGGAACAAGGTGAAGATATACATGATCATGAAGATTATGAAAATGTTTTTAGTGGTGAAATCTCAACCAAAGATGCTACTGTCTCTAGTGGTGCACCAAATGTTCAAGAGCTTGAGATGCTCTTAGGAGCATACTTTGTCCAAATTGGAGCCACATTGAACAAATTAGCCGCGCTAGCTGAATATGTCGAGGACACGGAGGACTACATAAACATAACATTGGACGACAAACAGAACCGTATTCTACAAGCAGGAGTTCAGATAGGAACAGCAAGTGTGATTGTGAATTTCTTTGTTGTTGTGACAGGTATTTTTGGAATGAATATTCATATCGACATAAATGAGAGTCCTGCAAATACAGTGTTCTTGGAGACAGTTTTTGGATGCACTGCTACTTGCATAGTCTTATACTTCCTTGCAATGTTTTGGTACAAGAAAAGGCGCATACTGTAA 1269 0.4043 MMGDERVARRQIGRKGSMARMWLMMGSDGQRQMVEAGRQLIMQRTGLTARDLRNLDPMLTYPSTIVGRDKAMVLNLEQIKAIITAHEVLLLNSRDPSVIPFVDELHARIIDHHSTPTTDHSQEGQNGEDKGEIKRDSSNNIKILPFEFVVLEACLEAVISSLENEANILELEAFPALDKLTSKISTLNLERVRHIKSRLVALSSRVQKVRDELENLLDDDGDMAELYLTDKLAKQKFEIFSAASSMNNNGDDMMTNRVLPQDIVDRTHPEISLEQGEDIHDHEDYENVFSGEISTKDATVSSGAPNVQELEMLLGAYFVQIGATLNKLAALAEYVEDTEDYINITLDDKQNRILQAGVQIGTASVIVNFFVVVTGIFGMNIHIDINESPANTVFLETVFGCTATCIVLYFLAMFWYKKRRIL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05750 422 Gene3D - 6 93 - -
Trre1g05750 422 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 10 421 IPR039204 -
Trre1g05750 422 CDD Mrs2_Mfm1p-like 22 421 IPR039204 -
Trre1g05750 422 Gene3D Magnesium transport protein CorA, transmembrane region 100 353 - -
Trre1g05750 422 FunFam Magnesium transporter MRS2-1 10 93 - -
Trre1g05750 422 Coils Coil 152 172 - -
Trre1g05750 422 Coils Coil 199 219 - -
Trre1g05750 422 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05750 Trre-Chr1 62418499 62420751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05750 22 422 MRS2 Gene Family AT3G19640 51.584 2.57e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05750 - - ccaj:109817554 413.305