Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05726 ATGGCAATTATGATTGTGTCTTTCAAATTTTCATTTTCCTTTTTTTATTTTCTCCTTCTTCTCATCATTAGCATTGAATCTCAAGCTAAAGCCCAACCAAATATTTTGCACAACTTTTGTATAAACAATAATGGCAACTACACAGCCAATAGCACATATCAAACCAACCTCAACATCCTTTTGTCCAATCTCTCTTCCAACACAGAAATCAACTATGGTTTCTACAATTTCTCTTATGGCCAAAACACCGACAAAGTAAACGCCATTGGACTCTGCAGGGGAGATGTTAAACCCGATGCTTGCCGCAAGTGTCTAAACGATTCAAGAGTTCTTCTGACACGACTTTGTCCAAATCAAAAAGAAGCAATTGGTTGGTATGAAAAATGCATGTTGCGCTACTCCAACCGGTCAATATTTGGCATTATGGAAGGATCACCTTCGTTTTACATGTCAAACATTGACAACGTAGCACAGCCGGATCAATTTAATCGATTTCTTGGGAACTTTATGACAAAACTGCAAGAAAAAGCTGCATCAAGTAATGACTCCCGTGTTAAGTATGCTACGGGTAATGAAGCTGATGTGAGCTTGAATTTTCAAACCTTATATGGTCTTGTGCAGTGTACACCTGATTTATCATCAATAAACTGCTATAGTTGTTTAGATGATGCTATCTCGGAAATTCCAAGTTGTTGTAATAACAGTATTGGTGCTAGAGTTGTTAAACCAAGTTGTAGTATTAGATTTGAATCAGCTCTCTTCTACGATCCTACGCCTGTAGTAGACACAGACGATCATAAGCCTGCAGTAGACACAGATGAAACCTCTCCACCACAAGAAAAAAGCAAATCATCTCATACTGTCATTGCCATAGTTGTGCCTACTGTTGCTGTTCTTGTTCTGCTAACTTTGATCATTTGCATATGCTTAAGTAGAAATCGCCATAGTATGGCAGGGTCAAATCTCGAAGCTATCATGGGAAAATATGATGATGAAGGTGAAGACGAAATGATGATTGCTGAGTCGTTGCAATTTGATTTTGATATCATACGAGTTGCTACCAGTGATTTCTCTGATTCTAATAAACTTGGACAAGGTGGATTTGGAATTGTTTATCGGGGCCAACTGCCTAATAGACAAATGATTGCTGTCAAAAGATTGTCAACAAATTCTGGCCAAGGAGATTTGGAATTCAAAAATGAAGTACTTTTAGTAGCCAAACTTCAACATCGAAATTTAGTTAGGCTACTTGGTTTTAGTTTGGAAAGGAGTGAAAGATTGCTTATTTATGAATTTGTTCCAAATAAAAGTCTTGATTACTTTATATTTGATCTAACAAGGAAAACAGAATTGAATTGGGAAAAGCGCTACAATATCATAAAAGGTCAAACTCAAGGAAGTACAAATAGAATTGTTGGAACCTATGGATATATGGCACCTGAGTATGCTATGCATGGAGAATTTTCAGTAAAATCAGATGTTTTCAGTTTTGGAGTATTGGTTCTTGAAATTATAAGTGGTCATAAAAATAGTGCAAACATTTGTCATGGGGAGGATGTGGAATATCTATTGACCTATGCATGGAGAAGCTGGAGAGAGGGGCAAGCTACAAATATTATAGATCCATCATTAAACAACATTTCAGCAAATGAAATAATGAGATGCATTCATATTGGTTTACTGTGTATTCAAGAAAATGTAGTTGACAGACCAACCATGGCTTCTGTTGCACTCATGCTTAATAGTAATTCCCTCACTCTCTCAATACCTTCGAAACCTGCGTATTTTATGGGAAGTGGAACTAGAAGCCTACAAGACATGCAGCAACAAGTTGATAATGTAAGTGCAACAAGATCGGATGAATCGGTGAACCAAATTTCAATTACTGATCCATACCCACGATAG 1905 0.3701 MAIMIVSFKFSFSFFYFLLLLIISIESQAKAQPNILHNFCINNNGNYTANSTYQTNLNILLSNLSSNTEINYGFYNFSYGQNTDKVNAIGLCRGDVKPDACRKCLNDSRVLLTRLCPNQKEAIGWYEKCMLRYSNRSIFGIMEGSPSFYMSNIDNVAQPDQFNRFLGNFMTKLQEKAASSNDSRVKYATGNEADVSLNFQTLYGLVQCTPDLSSINCYSCLDDAISEIPSCCNNSIGARVVKPSCSIRFESALFYDPTPVVDTDDHKPAVDTDETSPPQEKSKSSHTVIAIVVPTVAVLVLLTLIICICLSRNRHSMAGSNLEAIMGKYDDEGEDEMMIAESLQFDFDIIRVATSDFSDSNKLGQGGFGIVYRGQLPNRQMIAVKRLSTNSGQGDLEFKNEVLLVAKLQHRNLVRLLGFSLERSERLLIYEFVPNKSLDYFIFDLTRKTELNWEKRYNIIKGQTQGSTNRIVGTYGYMAPEYAMHGEFSVKSDVFSFGVLVLEIISGHKNSANICHGEDVEYLLTYAWRSWREGQATNIIDPSLNNISANEIMRCIHIGLLCIQENVVDRPTMASVALMLNSNSLTLSIPSKPAYFMGSGTRSLQDMQQQVDNVSATRSDESVNQISITDPYPR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05726 634 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 459 585 - -
Trre1g05726 634 MobiDBLite consensus disorder prediction 264 284 - -
Trre1g05726 634 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Trre1g05726 634 FunFam Cysteine-rich receptor-like protein kinase 10 146 254 - -
Trre1g05726 634 ProSiteProfiles Protein kinase domain profile. 357 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05726 634 Gene3D - 146 254 IPR038408 -
Trre1g05726 634 Gene3D - 33 137 IPR038408 -
Trre1g05726 634 Gene3D Phosphorylase Kinase; domain 1 321 432 - -
Trre1g05726 634 Gene3D Transferase(Phosphotransferase) domain 1 459 588 - -
Trre1g05726 634 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 33 138 - -
Trre1g05726 634 ProSiteProfiles Gnk2-homologous domain profile. 144 254 IPR002902 -
Trre1g05726 634 ProSiteProfiles Gnk2-homologous domain profile. 35 138 IPR002902 -
Trre1g05726 634 SUPERFAMILY Protein kinase-like (PK-like) 343 597 IPR011009 -
Trre1g05726 634 Pfam Protein tyrosine and serine/threonine kinase 360 457 IPR001245 GO:0004672|GO:0006468
Trre1g05726 634 Pfam Protein tyrosine and serine/threonine kinase 473 523 IPR001245 GO:0004672|GO:0006468
Trre1g05726 634 FunFam Cysteine-rich receptor-like protein kinase 10 322 432 - -
Trre1g05726 634 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 466 - -
Trre1g05726 634 MobiDBLite consensus disorder prediction 614 634 - -
Trre1g05726 634 Pfam Salt stress response/antifungal 40 135 IPR002902 -
Trre1g05726 634 Pfam Salt stress response/antifungal 155 251 IPR002902 -
Trre1g05726 634 MobiDBLite consensus disorder prediction 264 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05726 Trre-Chr1 62260714 62263604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05726 14 599 Receptor kinase-like Gene Family AT4G21410 43.779 2.73e-169 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre1g05726 PK_Tyr_Ser-Thr 1.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05726 - - mtr:11442310 710.679