Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05721 ATGTCAATTGTGTCTTGCAAGTTATTATTTTCCTTTTATTCTTTGCTCATTCTTCTCATTATTAGTATTGTATCTCAAGCTAAAGGCCAGCCAAATTTTTTGCGCAACTTTTGTATAAACGATAATGGCAACTATACAGCCAATAGCACATATCAAAAAAACCTTAACATCCTTTTGTCTGATCTCTCTTCCAACACAGAAATCGACTATGGTTTTTACAATTTCTCTTATGGCCAAAACAATGACAAAGTAAACGCCATTGGACTCTGCAGAGGGGATGTTAAACCCAATGTTTGCCGCAAGTGTCTCAACGATTCAAGAGTTCTTCTAACACGACTTTGTCCAAATCAAAAAGAAGCAATTGGTTGGTATGACAACTGCATGTTGCGCTACTCCAACCGATCAATATTTGGCATTATGGAAGGTTTACCTGCATTTTATTTGTGGAACACAAACAATGTATCACAGGTGGATCAATTTAATCATGTTCTTGGTGACTTGATGAAGAAACTGAAAGAAAAAGCAGCATCAAGTAATGACTCTCGTGTTAAGTATGCTACGAGTAGTGAAACTGATGTGAAATTGGATTTTCAAACCATACATGGTCTTGTGCAGTGTACACCTGATTTATCATTACAAGATTGCATGCATTGTTTAGAAGATGCTATCGTAGAAATTCCAAAATGTTGTAATAACAAACTCGGTGGTAGAGTTGTTAAACCAAGTTGTAATATTAGATATGAATCCTATCTCTTCTATGATCCTCCACTTGTAGTAGACACAAATGAAATCTCTCCACCACAAGAAAAAAGCAAATCATCGCATAGTAGTAGTACTACCATTGCCATAGTTGTGCCTACTGTTGCAGTAGGTCTTGTTCTGCTAAATTTGATCATTTGCATATGTTTAAAGAGAAATCGCCGGCGCCATAGTATGGCAGGGCCAAATCTCGAAGAAATAGAAGATGATGATGATATTGAAATTGCTGAGTCATTGCAATTCAACTTTGACACAATAGGAGTTGCTACCAATAACTTTTCCGAAGCTAATAAACTCGGAAATGGCGGATTTGGAGTTGTTTATCGGGGTAAACTCTCGAGTGGACAAATGATTGCGGTCAAAAGATTGTCGGTAGATTCTGGACAAGGAGATATTGAATTTAAGAATGAAGTGCTTTTATTGGCTAAGCTTCAACATCGAAATTTAGTCAAACTACTTGGTTTTTGTCTAGAAGGAAAAGAAAGACTACTTGTCTATGAATTTGTTCCTAATAAAAGCCTTGATTACTTTATATTTGATCCAATAAAGAAAGGACAATTAGATTGGGCAATGTGCTACAAAATTATTGGAGGTATTGCTAGAGGACTTCTTTACCTGCACGAGGATTCTCGACTTCGTATTATACATCGTGATCTTAAATCAGGTAACATTCTCTTGGACGAAGATATGAATGCAAAAATATCAGATTTTGGGATGGCCAGACTGCTACTTGTTGATCAAACTCAAGTAAATACAAATAAAGTCGTTGGAACATATGGATATATGGCTCCTGAATATGCGATGTTTGGACAATTTTCGGTAAAATCAGATGTTTTTAGCTTTGGTGTACTAGTTTTGGAGATTATAAGTGGCCAAAAAATTAGTCGCATTCTACAAGGGCAGAGTCAGGAGGATTTACTTAGCTTTGCATGGAGAAACTGGAGGGAGGGTACAATCACAAATATAATAGATCCATCATTGATCAATGGTTCACAAAATGAAATAATGAGATGCATTCACATTGGATTACTCTGTGTTCAAGAAAATGTGGTTGAAAGACCAACTATGGCAACCATTGCACTGATGCTTAGTAGTTATTCTTTCACTATGCCTTTACCTTTGGAGCCTGCAACTTCCTTCGGCGGAAGAACTAGAAGCTTTCCATACACGCAATCATCTGGGGAAGATATAAGAACAACAGAAGACAATAATAAGTTTCAAGTGTATATTAGTGTAAGCCAATTTTCTGATCCAGCATGTGCCCCCACCGCCGACATTGCGGTGGACCTGGTTATCTATCCGTTTCTTGCCTTAATCTGCTTCATCTTCTCCGCCATCTCAGCCTTAGCACCCAGAGCCATAAATGCATCTACTACTCACTATGATGTCAACAACGGTATCGAAGGCTCCACTCCTTTCCGCTCCGGCCACGTCATTATACTCTTCTCAGACATTGGATTTCTTATGGGAGTTGGATTCCTTCTGCTCGCCATTGCTAACCTCACTCAGATGAAGCTTGGAACATTCTCTTGTGGCAGCTCTTTTACTTGGGCTGTTGTTGTAGGCCTTTTCATCTTTACTTATTTGTCGCTTTTCTTGTTCATAGTTTCCAGTATATCCGATTATAAGAAAGCAAGAGTCCGCGGTGGCATTGGTTGTGAAATTATATGTCATTTTGTCCTATTATTAGTGGTACACGTAAAAACAACTCTGGTTGTACTTATCCAAGTCTCTTGCTCTTAG 2502 0.3809 MSIVSCKLLFSFYSLLILLIISIVSQAKGQPNFLRNFCINDNGNYTANSTYQKNLNILLSDLSSNTEIDYGFYNFSYGQNNDKVNAIGLCRGDVKPNVCRKCLNDSRVLLTRLCPNQKEAIGWYDNCMLRYSNRSIFGIMEGLPAFYLWNTNNVSQVDQFNHVLGDLMKKLKEKAASSNDSRVKYATSSETDVKLDFQTIHGLVQCTPDLSLQDCMHCLEDAIVEIPKCCNNKLGGRVVKPSCNIRYESYLFYDPPLVVDTNEISPPQEKSKSSHSSSTTIAIVVPTVAVGLVLLNLIICICLKRNRRRHSMAGPNLEEIEDDDDIEIAESLQFNFDTIGVATNNFSEANKLGNGGFGVVYRGKLSSGQMIAVKRLSVDSGQGDIEFKNEVLLLAKLQHRNLVKLLGFCLEGKERLLVYEFVPNKSLDYFIFDPIKKGQLDWAMCYKIIGGIARGLLYLHEDSRLRIIHRDLKSGNILLDEDMNAKISDFGMARLLLVDQTQVNTNKVVGTYGYMAPEYAMFGQFSVKSDVFSFGVLVLEIISGQKISRILQGQSQEDLLSFAWRNWREGTITNIIDPSLINGSQNEIMRCIHIGLLCVQENVVERPTMATIALMLSSYSFTMPLPLEPATSFGGRTRSFPYTQSSGEDIRTTEDNNKFQVYISVSQFSDPACAPTADIAVDLVIYPFLALICFIFSAISALAPRAINASTTHYDVNNGIEGSTPFRSGHVIILFSDIGFLMGVGFLLLAIANLTQMKLGTFSCGSSFTWAVVVGLFIFTYLSLFLFIVSSISDYKKARVRGGIGCEIICHFVLLLVVHVKTTLVVLIQVSCS 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05721 833 Gene3D - 144 252 IPR038408 -
Trre1g05721 833 Gene3D - 31 135 IPR038408 -
Trre1g05721 833 Pfam Salt stress response/antifungal 152 250 IPR002902 -
Trre1g05721 833 Pfam Salt stress response/antifungal 38 133 IPR002902 -
Trre1g05721 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Trre1g05721 833 FunFam Cysteine-rich receptor-like protein kinase 10 306 421 - -
Trre1g05721 833 Pfam Protein kinase domain 347 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05721 833 SUPERFAMILY Protein kinase-like (PK-like) 331 616 IPR011009 -
Trre1g05721 833 ProSiteProfiles Gnk2-homologous domain profile. 33 136 IPR002902 -
Trre1g05721 833 CDD STKc_IRAK 352 616 - -
Trre1g05721 833 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 31 136 - -
Trre1g05721 833 FunFam Cysteine-rich receptor-like protein kinase 10 144 252 - -
Trre1g05721 833 Gene3D Phosphorylase Kinase; domain 1 314 421 - -
Trre1g05721 833 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05721 833 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 645 - -
Trre1g05721 833 FunFam cysteine-rich receptor-like protein kinase 10 422 623 - -
Trre1g05721 833 Gene3D Transferase(Phosphotransferase) domain 1 422 623 - -
Trre1g05721 833 ProSiteProfiles Gnk2-homologous domain profile. 142 252 IPR002902 -
Trre1g05721 833 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Trre1g05721 833 SMART serkin_6 346 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05721 Trre-Chr1 62248588 62252381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05721 7 630 Receptor kinase-like Gene Family AT4G21410 50.154 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre1g05721 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05721 - - gmx:100791056 818.535