Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05720 ATGTCAAATGTTTCTTGCAAGTTATTATTTTCCTTTTATTCTTTGCTCCTTCTTCTCATTACTATTGTATCTCAAGCAAAAGGCCAGCCAAATTTTTTGTACAACTTTTGTATAAACGATAATGGCAACTACACAGCCAATAGTGCATATCAAAACAACCTTAACATCCTTTTATCCAATCTCTCTACCAACACTGAAATCGACTATGGTTTCTACAATTTCTCTTATGGCCAAAATACTGACAAAGTAAACGCCATTGGACTCTGCAGAGGAGATGTTAAACCTGATGTTTGCCGCAATTGTCTCAATGATTCAAGAGTTCTTCTTACACGACTTTGTCCAAATCAAAAAGAAGCAATTGGTGGGTATGAAAACTGCATGTTGCGCTATTCAAACCGATCAATATTTGGGATTATGCAAGGTTCACCTACATTTTATATGTGGAACACAAACAGTGTAACGGAGGTGGATCAATTTAATCGAGTTCTTGGGAACTTGATGAAGAAACTGAAAGAAAAAGCTGCATCAAGTGACGACTCTCGTTTTAAGTATGCTACGGGTAATGCAACTGATGTGAATTTGAATTTTCAAACTATATATGGTCTTGTGCAGTGTACACCTGATTTGTCAATGCAAGAATGCAACCATTGTTTAGAAGATGCTATCTTAGAAATTCCACGTTGTTGTAATAACAAGATTGGTGCTAGAGTTGTTAAACCAAGTTGTATTATTAGATACGAATCCCATCTCTTCTATGATCCTCCGTCTGTAGTAGACCCAGATGAACCCTCTCCACCACAAGAAAAAAGCAAATCATGGCATACTACCATTGCCATAGTTGTGCTGACTGTTGTTCTAGTTGTTTCTCTGCTAAGTTTCATTTGCATCTGCTTAATGAGAAATCGCCGCAAGGAATGGTTAAATCTTGAAGAAATAGAAGATGATGATAATGATTATATTGAAATTGCCGAGTCATTGCAATTCAACTTTGACACAATACGAGTTGCTACAAGTAACTTTTCCGAAGCTAATAAACTCGGACATGGCGGATTTGGAGTTGTTTATCGGGGTAAACTCTCCGGTGGACAAGTGATTGCAGTCAAAAGGTTGTCAAGAGATTCTGGACAAGGAGATATTGAATTTAAGAATGAAGTGCTTTTGCTAGTTAAACTTCAACATCGAAATTTAGTTAGATTACTGGGTTTTTGTCTAGAAGGACGAGAAAGACTGCTTGTGTATGAATTTGTACAAAATAAAAGCCTCGATTACTTTATATTTGATCCAATAAAGAAAGCAGAACTAGATTGGGAAAGACGCTACAAAATCATTGAAGGTATTGTGAGAGGCCTTCTTTACCTTCATGAGGATTCTCAACTTCGTATTGTACATCGTGATCTTAAAGCAAGTAACATTCTTTTGGACGAGAATATGAATGCTAAAATATCAGATTTTGGTATGGCCAGATTACTTGTTGATCAAACTCAAGTAAATACAGATAAAGTCGTCGGAACATATGGATATATGGCTCCTGAATATGCAATGTTTGGACAATTTTCAGCAAAATCAGATGTTTTTAGTTTTGGCGTATTAGTCCTGGAGATTATAAGTGGCCAAAAAATTAGCCAACTTTTTCATGGGCAGGAGGATTTACTTAGCTTTGCATGGAGAAACTGGAGGGAGGGTACAATCAAAGATATAATAGATCCATCATTAAACAATGCTTCACAAAATGAAATAATGAGATGCATTCACATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAACTATGGCAACCATTGTACTCATGCTTAGTAGTTATTCCATATCTCTCCCGGTACCTTTGGAGCCTGCATCTTTTATTGGTGGCAAAACTAGAAGCCTTCCAGGTCCAGACATGCAATATGGGGACGATAATTCAGGGGCGATCAGATCAAATCAATCCAAGTAA 1959 0.3686 MSNVSCKLLFSFYSLLLLLITIVSQAKGQPNFLYNFCINDNGNYTANSAYQNNLNILLSNLSTNTEIDYGFYNFSYGQNTDKVNAIGLCRGDVKPDVCRNCLNDSRVLLTRLCPNQKEAIGGYENCMLRYSNRSIFGIMQGSPTFYMWNTNSVTEVDQFNRVLGNLMKKLKEKAASSDDSRFKYATGNATDVNLNFQTIYGLVQCTPDLSMQECNHCLEDAILEIPRCCNNKIGARVVKPSCIIRYESHLFYDPPSVVDPDEPSPPQEKSKSWHTTIAIVVLTVVLVVSLLSFICICLMRNRRKEWLNLEEIEDDDNDYIEIAESLQFNFDTIRVATSNFSEANKLGHGGFGVVYRGKLSGGQVIAVKRLSRDSGQGDIEFKNEVLLLVKLQHRNLVRLLGFCLEGRERLLVYEFVQNKSLDYFIFDPIKKAELDWERRYKIIEGIVRGLLYLHEDSQLRIVHRDLKASNILLDENMNAKISDFGMARLLVDQTQVNTDKVVGTYGYMAPEYAMFGQFSAKSDVFSFGVLVLEIISGQKISQLFHGQEDLLSFAWRNWREGTIKDIIDPSLNNASQNEIMRCIHIGLLCVQENLVDRPTMATIVLMLSSYSISLPVPLEPASFIGGKTRSLPGPDMQYGDDNSGAIRSNQSK 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05720 652 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 628 - -
Trre1g05720 652 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Trre1g05720 652 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Trre1g05720 652 ProSiteProfiles Gnk2-homologous domain profile. 141 251 IPR002902 -
Trre1g05720 652 Gene3D Transferase(Phosphotransferase) domain 1 416 614 - -
Trre1g05720 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Trre1g05720 652 FunFam Cysteine-rich receptor-like protein kinase 10 301 415 - -
Trre1g05720 652 FunFam Cysteine-rich receptor-like protein kinase 10 143 251 - -
Trre1g05720 652 SMART serkin_6 340 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05720 652 FunFam cysteine-rich receptor-like protein kinase 10 416 614 - -
Trre1g05720 652 CDD STKc_IRAK 346 607 - -
Trre1g05720 652 Pfam Protein kinase domain 341 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05720 652 Gene3D Phosphorylase Kinase; domain 1 305 415 - -
Trre1g05720 652 Gene3D - 29 134 IPR038408 -
Trre1g05720 652 Gene3D - 142 251 IPR038408 -
Trre1g05720 652 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 135 - -
Trre1g05720 652 SUPERFAMILY Protein kinase-like (PK-like) 322 607 IPR011009 -
Trre1g05720 652 Pfam Salt stress response/antifungal 37 132 IPR002902 -
Trre1g05720 652 Pfam Salt stress response/antifungal 153 248 IPR002902 -
Trre1g05720 652 MobiDBLite consensus disorder prediction 629 652 - -
Trre1g05720 652 ProSiteProfiles Protein kinase domain profile. 340 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05720 Trre-Chr1 62245062 62248219 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05720 7 621 Receptor kinase-like Gene Family AT4G21410 49.379 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre1g05720 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05720 - - gmx:100791056 818.92