Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05715 ATGATTTCTTCCATTTCGCTTCTGTTATCCCTTCTAATCCCTCTATTTTTCACACTAAAATCCAAAGCCAATGCCCAACTAGTTTTCCGCTACCACGAATGTAACCAAGATTACGGAAACTTCACTGATAGCAGTGCCTACAAGAACAACCGTAACACGGTATTACAACAAATATATTCCAACAAAACAATAGACTATGGTTTCTTCAATTTCTCGTATGGAAATAAACCTAACAAAATATACGCAATTGGACTCTGTCGAGGAGATATAGAACCAGTTGATTGCCTCGGTTGCCTAACAACTTCCGCAGCACTTCTCACAGATCGATGTCCAATACAAAAAGAAGCAATAGGTTACTACGACTCGTGCATCTTACGCTATTCAGACTATCAATTTTTTGGCACGGTGGAAACTAAAACCAGTAATTTTTACTCTATCGAACCTAAGACAGTGGTGGAAGATGCATTTAAGCAAAAACTTAATGTCTTGTTGGACGAACTTATTAGCACAGCCGCGAATGGTGATTCGCGTAAGAAGTTTGCCGAAAAGAGTGTTAAAGTAATTGATAAACCAAGTAGTAATGAGACTATATATGGTTTGGTTCAATGTACACCAGATTTGACAAAGCAAGATTGTAGTACATGTTTGGATTCTGTTTCTCAAGGTCTTTCAAATTTCTGTGGAGATATGAAAGGTTGTTTGTATCTTGGACCAAGTTGTTCTGTTAGATATGATATTATTCCATTTTTTAAATCCATAAGAGGAGTTAAAAACAAAGAGTCACCAGCACCACAGCCACAACCTTCGGAAGCAATGGCTCATGCTAATGCACTTCCTCCTACAACTGCGAAAGGAAACGGAAGGAAATTAAGAACGGTCATCGCTATCGTTGTAGTAGTTGTGGCCGGCATACTGCTTATTGCGGCCATCGCCATTGTTGCACGCATTTATTTTGAAAGGAGAAAACCAAGACCCCAATGTACGCCTGAATTTGAAGGCCAAGAGAAAAATGAAGATGAATTTGAAGCTGAAGCTGAAGCTGGTAATGATCTTAAAGTTGGTGATTTGTTGCAATTTGACTTTGAAACCATCAGATTAGCTACAAACAACTTCTCTGATGCAAATAAGCTTGGTCAAGGTGGATTTGGAACTGTTTATAAGGGTATGCTCTCTGATGGACAAGATATTGCTATCAAAAGGTTGTCTACTAATTCAAAGCAAGGAGAAACAGAATTTAAGAATGAAGTGTTGCTGACAGGGAAGCTTCAACATAGAAACTTAGTTAAACTACTAGGTTTCTGTTTACAAAGAAAAGAGAGACTACTAATATATGAGTTTGTCACTAACAAAAGTCTTGATTATATCATATTTGATCCAATCAAGCGTGCAAATTTGAGTTGGGAAAGACGCTACAAAATCATAAGAGATATTGCCCGTGGTCTTCTCTATCTTCATGAAGATTCTCGATTACAAATTGTTCACCGTGATCTCAAAATAAGTAACATTTTGCTAGATGAAGAGATGAACCCAAAAATAACAGATTTTGGCATTGCAAAATTGTTTGATGCCAATCAAACTGATGGCACGACAAAAACTGTTATTGGAACTTTTGGATATATGGCTCCGGAGTACATTAGACATGGACAATTTTCAGTCAAGTCAGATGTGTTTAGTTATGGTGTAATCATTTTAGAAATTGTCTGTGGCCGAAAAGTCATCGAGAATCGTGGCGGGGATAATATAGAGGATCTACTAAGCATTGCATGGAGAAATTGGAAGGCAGGGACAACTTCAGATATTGTAGATCCATTATTAGACCAAGGTTTTAAAAAGAATGAAAAATTGAGAAGCATCCATGTAGGACTACTTTGTGTTCAAGAAGATATAGATGTGAGACCAACTATGAGTTCCGTTTTACAAATGCTTAGTAGTAGCACTTACCCACTTCCTGAGCCTTCTGAACCTCCATTTTTAATGCAACCTAAAAGGGCTTTATCTATAGCATTAAGTGGCCAATATTCAGGTTCCACAAAGTCAAGTGATTCAGGATCAGGAAGTCAATTTACTCATGGATCAACAAGTAAGTCCTTAGTTATAGGTCAATAA 2106 0.3751 MISSISLLLSLLIPLFFTLKSKANAQLVFRYHECNQDYGNFTDSSAYKNNRNTVLQQIYSNKTIDYGFFNFSYGNKPNKIYAIGLCRGDIEPVDCLGCLTTSAALLTDRCPIQKEAIGYYDSCILRYSDYQFFGTVETKTSNFYSIEPKTVVEDAFKQKLNVLLDELISTAANGDSRKKFAEKSVKVIDKPSSNETIYGLVQCTPDLTKQDCSTCLDSVSQGLSNFCGDMKGCLYLGPSCSVRYDIIPFFKSIRGVKNKESPAPQPQPSEAMAHANALPPTTAKGNGRKLRTVIAIVVVVVAGILLIAAIAIVARIYFERRKPRPQCTPEFEGQEKNEDEFEAEAEAGNDLKVGDLLQFDFETIRLATNNFSDANKLGQGGFGTVYKGMLSDGQDIAIKRLSTNSKQGETEFKNEVLLTGKLQHRNLVKLLGFCLQRKERLLIYEFVTNKSLDYIIFDPIKRANLSWERRYKIIRDIARGLLYLHEDSRLQIVHRDLKISNILLDEEMNPKITDFGIAKLFDANQTDGTTKTVIGTFGYMAPEYIRHGQFSVKSDVFSYGVIILEIVCGRKVIENRGGDNIEDLLSIAWRNWKAGTTSDIVDPLLDQGFKKNEKLRSIHVGLLCVQEDIDVRPTMSSVLQMLSSSTYPLPEPSEPPFLMQPKRALSIALSGQYSGSTKSSDSGSGSQFTHGSTSKSLVIGQ 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05715 701 PIRSF SRK 11 84 IPR024171 GO:0004674
Trre1g05715 701 PIRSF SRK 219 693 IPR024171 GO:0004674
Trre1g05715 701 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Trre1g05715 701 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Trre1g05715 701 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 685 - -
Trre1g05715 701 ProSiteProfiles Gnk2-homologous domain profile. 138 249 IPR002902 -
Trre1g05715 701 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 132 - -
Trre1g05715 701 Gene3D - 26 132 IPR038408 -
Trre1g05715 701 Gene3D - 140 249 IPR038408 -
Trre1g05715 701 Gene3D Transferase(Phosphotransferase) domain 1 447 648 - -
Trre1g05715 701 CDD STKc_IRAK 377 642 - -
Trre1g05715 701 Gene3D Phosphorylase Kinase; domain 1 332 446 - -
Trre1g05715 701 FunFam Cysteine-rich receptor-like protein kinase 10 140 249 - -
Trre1g05715 701 MobiDBLite consensus disorder prediction 671 701 - -
Trre1g05715 701 SUPERFAMILY Protein kinase-like (PK-like) 356 670 IPR011009 -
Trre1g05715 701 ProSiteProfiles Protein kinase domain profile. 371 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05715 701 Pfam Salt stress response/antifungal 153 245 IPR002902 -
Trre1g05715 701 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Trre1g05715 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Trre1g05715 701 SMART serkin_6 371 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05715 701 FunFam Cysteine-rich receptor-like protein kinase 10 333 446 - -
Trre1g05715 701 Pfam Protein kinase domain 372 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05715 701 FunFam cysteine-rich receptor-like protein kinase 10 447 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05715 Trre-Chr1 62215310 62230499 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05715 37 689 Receptor kinase-like Gene Family AT4G21410 44.662 7.53e-177 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre1g05715 Pkinase 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05715 - - tpra:123882259 951.814