Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05701 ATGGCAAATGTATCTTGCAAGTTATCATTTTCCTTTTTTTATTTTTTCATTCTTCTCATTATTATTATTGTATCTCAAGCTAAAGCCCAGCCAGATTTTTTGAACAACTTTTGTATAGACGATAATGGCAACTACACAGCCAATAGCACATATCAAAAAAACCTCAACATCCTTTTGTCCAATCTCTCTACCAACACACAAATCAACTACGGTTTCTACAATTTCTCTTATGGTCAAAACACCGACAAAGTAAACGCCATTGGACTCTGCAGGGGAGATGTTAAACCCGATGCTTGCCGCAAGTGTCTAAACGATTCAAGAGTTCTTCTAACACGACTTTGTCCAAATCAAAAAGAAGGAATTGGTTGGTATGAAAATTGCATGTTGCGCTACTCCAACCGATCAATATTTGGCCTTATGGAACAATTTCCTTGGTTTTATAGTGCAAGCAAAAGTATAGAAAAAGAGGTGGATCTATTTAATCGAGTTCTTGGGAACTTGATGAAGAAACTGAAAGAAAAAGCAGCATCGAGTAATGACTCTCGTGTTAAGTATGCTACGGGTAATGAAACTGATGTGAAGTTGAATTTTGAAACCATATATGGTCTTGTGCAGTGTACACCTGATTTATCATCACAAGATTGCATGGATTGTTTAAATGGTGCTATCGCAGAAATTCCAACTTGTTGTAGTAACATGTTAAGTGCTAGAGTTATTGAACCAAGTTGTTATATAAGATATGATTCTTATCCCTTCTACGGTCCTCCGCTTGTAGTAGGTCCTCCTCCACTTGTAGTAGACACAGATGAAACCTCTCGACCACAAGAAAAAAGCAAATCATCGCATACTAGTACTACCATTGCCATAGTTGTGCCTACTGTTGTTGTACTTCTTGTTCTGCTAAATTTGATCATTTGCATATGCTTAAGGAGAATTCGCGGGCGCCATAGTATGGCAGGGTCAAATCTTGAAGAAATACAAGATGATGATGATAATGATCATGATGATGATATTGAAATCGCTGAGTCACTGCAATTCAACTTTGACAAAATAGGAGTTGCTACAGATAACTTTTCCGAAACTAATAAACTTGGACATGGCGGATTTGGAGTTGTTTACCAGGGAAAACTTTCGAGTGGGCAAGTGATTGCGGTCAAAAGGTTGTCAAGAGATTCTGAACAAGGAGATATTGAATTTAAAAATGAAGTGCTTTTATTGGCTAAGCTTCAGCATCGAAATTTAGTCAAACTACTTGGTTTTTGTCTAGAAAGAAAAGAAAGGCTACTTGTTTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTTATATTTGATCCAATAAAGAAAGCACAATTAGATTGGGAAAGGCGCTACAAAATCATTGGAGGTATTGCTAGAGGCCTTCTTTACCTTCACGAGGACTCTCGACTTCGTATTATACATCGTGATCTTAAAGCAAGTAACATTCTCTTGGACGAAGATATGAATGCTAAAATATCAGATTTTGGGATGGCCAGGCTATTGCTTGTTGATCAAACTCAAATAAATACAGATAAAATCGTTGGAACCTATGGATATATGGCTCCTGAGTATGCAATGTTTGGACAATTTACGGTAAAGTCAGATGTTTTTAGTTTTGGTGTATTAGTTCTAGAGATTATAAGTGGCCAAAAAATTAGTCGCAATATTCTTCAAGGACAGAGTCAGGAGGATTTACTTAGCTTTGCATGGAGAAACTGGAGGGAGGGTACAATCACAAATATAATAGATCCATCATTAATCAACGGTTCACAAAATGAAATAATGAGATGCATTCACATTGGATTACTCTGTGTTCAAGAAAATTTGGTTGACAGACCAACTATGGCAAACATTGCACTGATGCTTAGTAGTTATTCTTTCACTATGCCTCTACCTTTGGAGCCTGCATCTTCCTTTTGTGGAAGAACTGGTAGCCTTACATACACGCAATCATCCGGGGAAGATAAAGGAACAACAGGTTCACATGAATCCAAGAAAAGTTAA 2025 0.3694 MANVSCKLSFSFFYFFILLIIIIVSQAKAQPDFLNNFCIDDNGNYTANSTYQKNLNILLSNLSTNTQINYGFYNFSYGQNTDKVNAIGLCRGDVKPDACRKCLNDSRVLLTRLCPNQKEGIGWYENCMLRYSNRSIFGLMEQFPWFYSASKSIEKEVDLFNRVLGNLMKKLKEKAASSNDSRVKYATGNETDVKLNFETIYGLVQCTPDLSSQDCMDCLNGAIAEIPTCCSNMLSARVIEPSCYIRYDSYPFYGPPLVVGPPPLVVDTDETSRPQEKSKSSHTSTTIAIVVPTVVVLLVLLNLIICICLRRIRGRHSMAGSNLEEIQDDDDNDHDDDIEIAESLQFNFDKIGVATDNFSETNKLGHGGFGVVYQGKLSSGQVIAVKRLSRDSEQGDIEFKNEVLLLAKLQHRNLVKLLGFCLERKERLLVYEFVPNKSLDYFIFDPIKKAQLDWERRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEDMNAKISDFGMARLLLVDQTQINTDKIVGTYGYMAPEYAMFGQFTVKSDVFSFGVLVLEIISGQKISRNILQGQSQEDLLSFAWRNWREGTITNIIDPSLINGSQNEIMRCIHIGLLCVQENLVDRPTMANIALMLSSYSFTMPLPLEPASSFCGRTGSLTYTQSSGEDKGTTGSHESKKS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05701 674 Gene3D Transferase(Phosphotransferase) domain 1 434 636 - -
Trre1g05701 674 FunFam Cysteine-rich receptor-like protein kinase 10 322 433 - -
Trre1g05701 674 FunFam cysteine-rich receptor-like protein kinase 10 434 636 - -
Trre1g05701 674 CDD STKc_IRAK 364 629 - -
Trre1g05701 674 Pfam Protein tyrosine and serine/threonine kinase 361 626 IPR001245 GO:0004672|GO:0006468
Trre1g05701 674 SMART serkin_6 358 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05701 674 Pfam Salt stress response/antifungal 38 133 IPR002902 -
Trre1g05701 674 Pfam Salt stress response/antifungal 156 250 IPR002902 -
Trre1g05701 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Trre1g05701 674 SUPERFAMILY Protein kinase-like (PK-like) 341 629 IPR011009 -
Trre1g05701 674 Gene3D - 31 135 IPR038408 -
Trre1g05701 674 Gene3D - 146 252 IPR038408 -
Trre1g05701 674 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 31 136 - -
Trre1g05701 674 FunFam Cysteine-rich receptor-like protein kinase 10 145 252 - -
Trre1g05701 674 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Trre1g05701 674 ProSiteProfiles Protein kinase domain profile. 358 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05701 674 Gene3D Phosphorylase Kinase; domain 1 321 433 - -
Trre1g05701 674 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 660 - -
Trre1g05701 674 ProSiteProfiles Gnk2-homologous domain profile. 142 252 IPR002902 -
Trre1g05701 674 ProSiteProfiles Gnk2-homologous domain profile. 33 136 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05701 Trre-Chr1 62127663 62130692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05701 14 643 Receptor kinase-like Gene Family AT4G21410 50.152 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre1g05701 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05701 - - lang:109353867 762.681