Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05695 ATGTTTTCTTCACTTTGGCTTCTGCTTTCATTTCTTCCTCTCTTTTTCACACAAATATCTGAAGCCAATGACCAGCTAATTCCCCGCAGCTACAAATGTAACAAAATTCTCGGAAACTTTACTGATGATAGTGACTACGGGAACAACCGCGACACGGTTTTAGCACAAATATATTCCGACAAAAAAATAGACTACGGATTCTACAATTTCTCGTACGGTGTAGACAATGACCAAGTAAACGCAATTGGAATTTGTAGAGGAGACATCAAACCAGATGATTGCCGTGATTGCCTGAAAACTTCTACGGCATTTCTCACAAATCGGTGTCCACTATCAAAAGAAGCAATTGTTTACTACGACTTATGCACCTTACGCTATTCAAACCATTCAATATTTGGTGTGATGGAAACTGACACCGGTAAATATTACGATATCCAGTCCAAGACAGTGGTGGATGATGCATTTAATCAAACACTTATTAATTTGTTGGAAGAACTTAAAAGCGCGGCCGCCAAAGGTGACTCGCGTAAGAAGTATGCTGAAAATAATGTTACCGTAATTGATGAATCAAGTAGTAGTCACAGTGAAAACACTATACATGGTCTTGTTCAGTGTACACCAGATTTGTCTAAGCAAGATTGTACTCATTGCTTGGATTTGGCTTTCAAGGATCTTTCAAAGTTCTGTAAAGACATGCAAGCTTGTTTGTATATAGGACCAAGTTGTTCCATTAGATATAAAATATCTCAAATTTTTATACCATTAGTCCACGACTGTATTTCAGAGCCACCAACATCACAGCCTAATTATTTTTTGACAGCATCGCCACCACAGCCTCTATTTTTTCTTCTGTCGTCATCACCACCAGAGCCGGAGCCACTTCCTCTTGCACCTCCTCCTGCGTCACCATTGGAACCACCTCCTCCTCCACCACCACCTCCTCCTCCTGAAACTCCATCACTATCGGAACCACCTTCTACTACACCTTCTCCTGAAGCATCAATAGTGGAACCACCTCCTTCTGTACCTCCTCCTGAAACTGCATCACCACCGGAATCACTTCCTTCTACACCTCCTCCTGAAACTGCATCACCATCAGATTCAGAATCACTTCCTTTAGCACCTCCTCCAAAAGCTGGAAAAAGTTGGAAATTTATAACGGCCATAGTTGTCCCGGTTGTTCTGAGTGGCATAGTACTGATTGTTGGTATATGCATTTATTGTTTAAGATGGAGAACCCCAAGATCCACTAACACTGCTGTTGAATCTGAAGGCCAAGAGAAATATGAAGAAGAAGTCTTTTTTGAAGCAACAAATGAAGAAGAATTTGAAATTGAAATTGAAACAGAAGTTGCTAATGATCTTAAAGTTGGTGATATATTGCAATATGACTTTGAAATCATCAGATTAGCTACAAACAACTTCTCTGATGCAAATATTCTTGGTGAAGGTGGATTCGGAATTGTTTATAAGGGTATGCTCCCTAATGGACAAGATATTGCTATCAAAAGGTTGGCCAATAATTCTAAGCAAGGAGAAATAGAATTTGAGAATGAAGTGTTGCTGACAGGGAAGCTTCAACATAGAAACTTAGTTAAGCTACTAGGTTTCTGTTTACAAAGAAAAGAAAGACTACTAATATATGAGTTTGTCACTAACAAAAGTCTTGATTATATCATATTTGATCCAATCAAGCGTGCAAATTTGAATTGGGAAAGACGCTACAAAATTATAAGAGATATTGCCCGTGGTCTTCTTTATCTTCATGAAGATTCTCGATTACAAATTGTTCACCGTGATCTAAAAACAAGTAACATTCTAATAGATGAGGAGTTGAACCCAAAAATTACCGATTTTGGCATTGCAAGATTGTTTGATGCGAATCAAACTCATGGCATGACGAAGACCCTTGTTGGAACTTTTGGATATATGGCTCCAGAATATATTAGACACGGAGAATTCTCAGTCAAATCAGATGTATTCAGTTATGGTGTAATCATGTTAGAAATTATTTGTGGCCGGAGAATCATTGAGAATCATTACGGGCAGAATCCAGAGGATTTATTAAGCATCGCATGGAAAAATTGGAAGGCAGGGACAAGTTTAGATATTGTAGATCCAATATTAAGTGAAGGCATTGACAAGAATGAAAAAATGAGAAGCATCCATGTTGGATTACTATGTGTTCAAGAAGATATAGCTATGAGACCAACAATGAGTTCAGTTTTAACAATGCTAAATAGCACTTCTTTCCCACTTCCTGAACCTTTGGAACCTCCTTTTTCAATGCATCCAAGAATGGCATTATCTTTAGTGTCAACGTCTGATTCAGGATCAGGAGGAAGTCAATTTACTCAAGGATCAACAACTAAGTCCTCAGCTACAGATTAA 2391 0.3848 MFSSLWLLLSFLPLFFTQISEANDQLIPRSYKCNKILGNFTDDSDYGNNRDTVLAQIYSDKKIDYGFYNFSYGVDNDQVNAIGICRGDIKPDDCRDCLKTSTAFLTNRCPLSKEAIVYYDLCTLRYSNHSIFGVMETDTGKYYDIQSKTVVDDAFNQTLINLLEELKSAAAKGDSRKKYAENNVTVIDESSSSHSENTIHGLVQCTPDLSKQDCTHCLDLAFKDLSKFCKDMQACLYIGPSCSIRYKISQIFIPLVHDCISEPPTSQPNYFLTASPPQPLFFLLSSSPPEPEPLPLAPPPASPLEPPPPPPPPPPPETPSLSEPPSTTPSPEASIVEPPPSVPPPETASPPESLPSTPPPETASPSDSESLPLAPPPKAGKSWKFITAIVVPVVLSGIVLIVGICIYCLRWRTPRSTNTAVESEGQEKYEEEVFFEATNEEEFEIEIETEVANDLKVGDILQYDFEIIRLATNNFSDANILGEGGFGIVYKGMLPNGQDIAIKRLANNSKQGEIEFENEVLLTGKLQHRNLVKLLGFCLQRKERLLIYEFVTNKSLDYIIFDPIKRANLNWERRYKIIRDIARGLLYLHEDSRLQIVHRDLKTSNILIDEELNPKITDFGIARLFDANQTHGMTKTLVGTFGYMAPEYIRHGEFSVKSDVFSYGVIMLEIICGRRIIENHYGQNPEDLLSIAWKNWKAGTSLDIVDPILSEGIDKNEKMRSIHVGLLCVQEDIAMRPTMSSVLTMLNSTSFPLPEPLEPPFSMHPRMALSLVSTSDSGSGGSQFTQGSTTKSSATD 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05695 796 MobiDBLite consensus disorder prediction 282 362 - -
Trre1g05695 796 MobiDBLite consensus disorder prediction 282 377 - -
Trre1g05695 796 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 95 791 - -
Trre1g05695 796 SUPERFAMILY Formin homology 2 domain (FH2 domain) 306 316 - -
Trre1g05695 796 FunFam Cysteine-rich receptor-like protein kinase 10 437 550 - -
Trre1g05695 796 Gene3D - 141 250 IPR038408 -
Trre1g05695 796 Gene3D - 29 130 IPR038408 -
Trre1g05695 796 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Trre1g05695 796 Pfam Salt stress response/antifungal 152 247 IPR002902 -
Trre1g05695 796 Gene3D Transferase(Phosphotransferase) domain 1 551 751 - -
Trre1g05695 796 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Trre1g05695 796 FunFam cysteine-rich receptor-like protein kinase 10 551 753 - -
Trre1g05695 796 ProSiteProfiles Gnk2-homologous domain profile. 137 251 IPR002902 -
Trre1g05695 796 ProSiteProfiles Protein kinase domain profile. 475 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05695 796 CDD STKc_IRAK 481 747 - -
Trre1g05695 796 Pfam Protein kinase domain 477 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05695 796 SUPERFAMILY Protein kinase-like (PK-like) 461 771 IPR011009 -
Trre1g05695 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Trre1g05695 796 Gene3D Phosphorylase Kinase; domain 1 436 550 - -
Trre1g05695 796 MobiDBLite consensus disorder prediction 772 796 - -
Trre1g05695 796 ProSitePatterns Protein kinases ATP-binding region signature. 481 503 IPR017441 GO:0005524
Trre1g05695 796 SMART serkin_6 475 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05695 796 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05695 Trre-Chr1 62094008 62100121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05695 358 778 Receptor kinase-like Gene Family AT4G21410 50.233 2.90e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre1g05695 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05695 - - tpra:123882259 556.984