Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05682 ATGAATCCTAAAATCTCAGATTTTGGCATGGCTAGAATTGTTGACATTGACCAAGATCGGGGTAATACTAGCAGAATTGTGGGAACGTATGGTTATATGTCTCCGGAATATGCAATGCTTGGAAAATTCTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTAATGATTATAGAGATAATCACCGGAAAAAAGAATGCAAACTCTTACGAATCAAATCAGAATGCTAAAGGCCTCTTAAGCTATGTTTGGAGACAATGGAATGATGAAACATTGTTGACTGCAATTGACCCAAGTATTAAAGAAAAATATTCTCAAATTGAAGTTATAAAATGCATTCAAATTGGCTTATTATGTGTTCAAGAAAATCCAAATGCTAGACCTACAATGTCAACAGTTGTTTCATATCTTACTAGGCACTCATCACTTGAATTGCCATCTCCACAAGAACCATCATTTGTGTTGCATGGTGGTGGAAGTGGAATGGATAAAAATATTGTTGCGCAGCAAGAGTCTAGCTCAGGTCTATCTGCTAGTAGTTCTAATCCATTTTCAGTTAATGACATGTCAATCAGTACATTTTATCCTCGTTAA 591 0.3519 MNPKISDFGMARIVDIDQDRGNTSRIVGTYGYMSPEYAMLGKFSEKSDVFSFGVMIIEIITGKKNANSYESNQNAKGLLSYVWRQWNDETLLTAIDPSIKEKYSQIEVIKCIQIGLLCVQENPNARPTMSTVVSYLTRHSSLELPSPQEPSFVLHGGGSGMDKNIVAQQESSSGLSASSSNPFSVNDMSISTFYPR 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05682 196 SUPERFAMILY Protein kinase-like (PK-like) 2 152 IPR011009 -
Trre1g05682 196 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 192 - -
Trre1g05682 196 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05682 196 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 14 141 - -
Trre1g05682 196 Pfam Protein tyrosine and serine/threonine kinase 4 136 IPR001245 GO:0004672|GO:0006468
Trre1g05682 196 Gene3D Transferase(Phosphotransferase) domain 1 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05682 Trre-Chr1 62028112 62028873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05682 1 196 Receptor kinase-like Gene Family AT4G11530 48.469 2.50e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre1g05682 PK_Tyr_Ser-Thr 2.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05682 - - gmx:100785282 267.314