Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05591 ATGGACTTTGTAAGTTGTACTCTTGTACTTCTCATAACATACTTATCCATTCATACTTTTAGCTTACTACTTAGAAGGATAACAAAACCAAACTATAAGCTTCCACCAGGACCTACCCCTCTTCCTATCATAGGAAACCTCCTTGCATTAGGACAAAAGCCTCACAACTCATTAGCAAAACTTGCCAAAATTCATGGCCCTTTAATGAGTCTCAAATTTGGCCAAATAACCACTATTGTAATATCCTCAGCAACAATGGCCAAAGAGGTTCTCCTAACCAATGACAAGTTCTTGTCAAACAGAAACATACCTCAAACTGTGTCAGTTGTCGACCACGAACAATATAGTCTTGCATTCATGCCCATTTCACCTCTTTGGAAGGAATTGAGAAAAATATGCAACACTCAATTACTTTCTCACAAGAGTCTTGATTCCAGCCAAGACGTTAGGCGTAACAAAATTCAACAGCTTCTCAACGATATTCAACAAAGTAGTCAAATTGGCGAAGCAATAGACATCGGAACAATAGTGTTCAAGACTACTATAAATTTATTATCAAACACCGTTTTCTCTATGGATTTGATTCACTCTAATGGTGCAGCAGAAGAGTTTAAAGATGTGGTGACTAATATAACCAAACTTGCTGGAACACCAAATGTGGCTGATTTTTTTTCTGCATTGAAGATGCTTGATCCACAAGGCTTAAAGAGAAGACAAACAAAGAACGTAAGAAAAGTGTTAGACATATTTGGAGATTTGATTAACCAACGTTTGAAGATGAGGGAAGGTACATGTGTAGACACCAACAAAGATATGTTAGATGCCATGCTCAACATTTCTAAGGATAATGAGTTTATGGACAAAAATATGATCCAACATCTATCACATGATATATTTGTCGCGGGAACAGATACAACAACATCTACACTAGAATGGGCAATGACAGAGCTTATGCGCAATCCAGAAGCTATGCAAAAAGCCAAGAAAGACTTGGAACAAACAATTGGTTTAGGTGTTCCACTTGAAGAGTCTAATATCTCTAAGCTCCCATACTTACATGCAATAATAAAAGAAACACTTCGAAAGCACCCGCCAGTTCCATTTTTGCTGCCACGAAAAGCGGAGAGAGATGTTGAGATAGGTGGTTACACTATTCCGAAAGATGCACAAGTGCTGGTTAATGTGTGGACTATTTGTAGAGATCCAACCTTGTGGGAGAATCCAACTTTGTTCTCTCCTGAAAGGTTTCTGGGGTCTGATATTGATGTCAAAGGAAGAGATTTCGAGCTTGTACCATTTGGTGGTGGGAGGAGAATTTGTCCTGGATTACAATTGGCTAATAGAATGTTACTATTAATGTTGGGTTCATTGATTAACTCATTTGATTGGGAGCTTGAAGGTGGCATGAAACCAGAAGATATGGACATGGATGATAAATTTGGGATTACTCTCCAAAAGGCTCAACCCCTTCGAATTGTTCCTCTCAAATTAAGTAACTAG 1500 0.3833 MDFVSCTLVLLITYLSIHTFSLLLRRITKPNYKLPPGPTPLPIIGNLLALGQKPHNSLAKLAKIHGPLMSLKFGQITTIVISSATMAKEVLLTNDKFLSNRNIPQTVSVVDHEQYSLAFMPISPLWKELRKICNTQLLSHKSLDSSQDVRRNKIQQLLNDIQQSSQIGEAIDIGTIVFKTTINLLSNTVFSMDLIHSNGAAEEFKDVVTNITKLAGTPNVADFFSALKMLDPQGLKRRQTKNVRKVLDIFGDLINQRLKMREGTCVDTNKDMLDAMLNISKDNEFMDKNMIQHLSHDIFVAGTDTTTSTLEWAMTELMRNPEAMQKAKKDLEQTIGLGVPLEESNISKLPYLHAIIKETLRKHPPVPFLLPRKAERDVEIGGYTIPKDAQVLVNVWTICRDPTLWENPTLFSPERFLGSDIDVKGRDFELVPFGGGRRICPGLQLANRMLLLMLGSLINSFDWELEGGMKPEDMDMDDKFGITLQKAQPLRIVPLKLSN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05591 499 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 CDD CYP76-like 62 494 - -
Trre1g05591 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Trre1g05591 499 Pfam Cytochrome P450 35 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 SUPERFAMILY Cytochrome P450 35 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 496 - -
Trre1g05591 499 Gene3D Cytochrome P450 24 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05591 499 FunFam Cytochrome P450 76C4 26 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05591 Trre-Chr1 61253772 61255383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05591 1 496 Cytochrome P450 AT2G45550 44.466 6.12e-155 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05591 - - gmx:100807367 743.421