Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05557 ATGATGGAAGGAACTACTAGCTATTCCAAATCAGAGGCCAAAGAAGAAAGTGGTGTTGACTTGACTCAAATATCTCTTCGACCCATTAGTCTTACTGATCTTGATGATCTAATGTTGTGGACCAGTGATGAAAAAGTGGCCATGTATTGCACCTGGGAACCTTATACCAGCAAAGAAGAAGGCGTCAACTTTATCCAAAACATAGCAAGCAAATCTTTATGGTTCAGAGCGATTTGCCTTCGCAACCGTGCAATTGGGTGCATCGACTTTTGGTCGGGTAACGATAGATGCAAGGACAAAACTGCTGAACTTGGCTATGCTCTGAGCTCCATGTATTGGGGCAAAGGGATTGCCACAATAGCCGTGAAACAAGTGGTTGAAGTTGCATTTAAGGAGTTTCCATACTTGGAGAGGCTTGAAGCTCAAGTTAATGTGGAAAATGTTGCTTCTCAGAGAGTACTGGAGAAGGCTGGTTTTCAAAGGGAGGGAGTTCTCAGGAAATATTGCTTCATCAAGGGAAAAAGTAGAGATATGGTTATGTTCAGTGTTCTGTCAAATGATCTTCAAGTTTGA 573 0.4223 MMEGTTSYSKSEAKEESGVDLTQISLRPISLTDLDDLMLWTSDEKVAMYCTWEPYTSKEEGVNFIQNIASKSLWFRAICLRNRAIGCIDFWSGNDRCKDKTAELGYALSSMYWGKGIATIAVKQVVEVAFKEFPYLERLEAQVNVENVASQRVLEKAGFQREGVLRKYCFIKGKSRDMVMFSVLSNDLQV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05557 190 Gene3D - 9 189 - -
Trre1g05557 190 Pfam Acetyltransferase (GNAT) domain 25 160 IPR000182 GO:0016747
Trre1g05557 190 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 24 184 IPR016181 -
Trre1g05557 190 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 24 177 IPR000182 GO:0016747
Trre1g05557 190 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 15 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05557 Trre-Chr1 60925536 60926108 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre1g05557 Acetyltransf_3 9.4e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05557 - - gmx:111043201 291.197