Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05494 ATGATTCAGGAACAAGTGAGATGTGTTTGTCTTGGTCTGTTGGAACAAGGTTGTTCATGGTATTGCAACAAAGGATATATTGTTGAACATGTATTTGACACAGCGGCTTATAATGAGAATTCTTGTGAAATTGGTGTTTTCTCAAAACTTACCAATGCCTATCGTTTAGTTGCAATTGGTGGTTTTGAAAATATCTACAGGTATTGCCTTCCCATATCCCAGATCTTTCATTTGAAGATACAAAAGGATAAAGGCATACCTGTACAAAGGTGTTGCACTTTGAAGCTTGCTGGGATGGATTATTGTGGCACTACAAGGTAG 321 0.3769 MIQEQVRCVCLGLLEQGCSWYCNKGYIVEHVFDTAAYNENSCEIGVFSKLTNAYRLVAIGGFENIYRYCLPISQIFHLKIQKDKGIPVQRCCTLKLAGMDYCGTTR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05494 106 Gene3D - 31 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05494 Trre-Chr1 60456493 60458932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05494 39 66 Eukaryotic Initiation Factors Gene Family AT3G55620 82.143 7.26e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05494 K03264 - jre:118344741 53.5286