Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05489 ATGTCTTTGTCACTACACATTACTGCTACTACTATACTTTCCTTAAATCTCCTTCTCTTGCTTGTTAATGTTAACTCATCATCATCACAATCAATAGATCCCTACAAAACACTTCACTTAATCCCCAACCCAAACGGCACCGTCACACGTTTAGACATAATCCCACAATCCCCACCCTCACCTGATCCAAATCTCCCAACACCTGCTCTCTCCAAAGACCTCACAATCAACCAATCAAAACACACTTGGGCACGAATCTACCTACCCCACTCCAAGTTAAAGTCCAAACTACCCCTCATCGTTTTCTACCATGGCGGTGGTTTCATTTTCTACAGTGCCGCTTCAACTTACTTTCACAACTTCTGCGCCAATCTCGCTAATCAAACTCAATCCGTCGTCGTTTCACTCGAATACCGTCTCGCACCTGAACATCGTCTTCCTGCAGCGTATGATGACTCCGTGGAAGTGCTTCACTGGATTAAAACCTCAAACGATCCATGGTTGACACGTCACGCTGATTATTCTCGTTGTTATCTAATGGGAGAGAGTGCTGGAGGTAATATCGCCTACAACGCGGGTCTACGTGCGGCTTCAATAGTTGATAAGATTAAACCGGTTAATATCAAAGGGTTGATATTGATTCAACCGTTTTTTGGTGGGACCAAGAGAACACCGTCTGAATTAAGACTTGAGAAGGATTTGAATCTACCGTTGATTGTTACTGATTCGATGTGGAATTTGTCGTTGCCCTTAGGCGTTGATCGTGATTACTTGTATTCTAATCCAACGGTGAATGGTGGTGGTAAGATTTTGGATAAGATTAGGTTGTTTAAGTGGAAAGTTGCGGTGTTTGGGTGTGATGGGGATCAACTTGTGGACAGACAGAGATATTTGGTGAAGTTGCTTGAGGGTAAAAGTGTCAATGTGGTGGGTCAATTTTATAGTGGGGGTAGACATGGTATTTTTGTGGGTGATCCTTCTATGTCTGAAAAGGTGTTCGATTTAGTTAAGAGTTTTTATTATTGA 1026 0.4259 MSLSLHITATTILSLNLLLLLVNVNSSSSQSIDPYKTLHLIPNPNGTVTRLDIIPQSPPSPDPNLPTPALSKDLTINQSKHTWARIYLPHSKLKSKLPLIVFYHGGGFIFYSAASTYFHNFCANLANQTQSVVVSLEYRLAPEHRLPAAYDDSVEVLHWIKTSNDPWLTRHADYSRCYLMGESAGGNIAYNAGLRAASIVDKIKPVNIKGLILIQPFFGGTKRTPSELRLEKDLNLPLIVTDSMWNLSLPLGVDRDYLYSNPTVNGGGKILDKIRLFKWKVAVFGCDGDQLVDRQRYLVKLLEGKSVNVVGQFYSGGRHGIFVGDPSMSEKVFDLVKSFYY 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05489 341 Gene3D alpha/beta hydrolase 35 341 IPR029058 -
Trre1g05489 341 PANTHER ARYLACETAMIDE DEACETYLASE 50 313 - -
Trre1g05489 341 Pfam alpha/beta hydrolase fold 100 322 IPR013094 GO:0016787
Trre1g05489 341 SUPERFAMILY alpha/beta-Hydrolases 44 336 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05489 Trre-Chr1 60426533 60427558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05489 45 336 Carbohydrate Esterase AT5G16080 35.294 1.99e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05489 - - gmx:100777262 471.855