Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05488 ATGTCAGGTCAACCCTCACCACCTGAACCCATCGATCCCTTTCTTCATCTCAAAATCTCCCTAAATCCCGACGGCACAATCACACGTCTACGTGGTGATCCACAAATCTCACCCTCACCAAATCCCAACCATCCAATCTCCGTTCTCACCAAAGACATCCCCATCAACCCATCACACAACACCACCGCTCGAATATTCCTTCCCCGCAAAGCACTCGATAACTCCTCCATAAACAAGCTCCCTATAATCGTTTACTTTCACGGTGGCGGTTTCATCCTCTTCAGTGCAGCCTCAGATTTTCTTCACGATCTTTGTATAAAGCTTGCAAACGACGTTAACTCCATCGTTGTTTCCGTTGACTACCGTTTAGCACCAGAACACCGTTTACCTGCTGCGTATGATGATGCTATGGAAGCTCTTCACTGGGTTAAAACTCAATCAGATGATTGGTTGAGAAATTATGGTGATTATTCAAATTGTTACATCATGGGAGGTAGTGCCGGAGCAAATATCGCATACAAAGCAGGTCTGCGTGTAGCTGAAGAGACTAATCTTAATCATGATTATCTTAAACCACTTAAGATTAAAGGCTTAATATTGTCTCAACCGTTTTTTGGTAGTAACAAGAGGATAGCTTCGGAGTTGAGGCTGTTAAACGATACCGTTTTGCCGCCACACGTGTGTGACTTGATGTGGGAGCTTTCGTTGCCGGTTGGAGTTGACCGTGATCATGAATATTGCAATCCAACGGTTGGTGATGGTGTTGAGGGTTTGGATAGGGTGAGGAAGCTTGGGTGGAGGGTGTTGGTGAGTGGGTGCGATGGAGACCCGTTGATGGACCATCAGACGGCGTTGGCGAGAGTGATTGAAGAGAAAGGTGTTGTGCTGGTGAGAAGTTTTACTGAAGGGGGTTGTCATGGGTGTGAAGTTCGTGATCTCATCAAACAAAAGCAATTGCATGATCTAATTAAAGATTTCATTTCTATCCTCCAAAATTAA 999 0.4505 MSGQPSPPEPIDPFLHLKISLNPDGTITRLRGDPQISPSPNPNHPISVLTKDIPINPSHNTTARIFLPRKALDNSSINKLPIIVYFHGGGFILFSAASDFLHDLCIKLANDVNSIVVSVDYRLAPEHRLPAAYDDAMEALHWVKTQSDDWLRNYGDYSNCYIMGGSAGANIAYKAGLRVAEETNLNHDYLKPLKIKGLILSQPFFGSNKRIASELRLLNDTVLPPHVCDLMWELSLPVGVDRDHEYCNPTVGDGVEGLDRVRKLGWRVLVSGCDGDPLMDHQTALARVIEEKGVVLVRSFTEGGCHGCEVRDLIKQKQLHDLIKDFISILQN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05488 332 PANTHER ARYLACETAMIDE DEACETYLASE 29 308 - -
Trre1g05488 332 Gene3D alpha/beta hydrolase 14 329 IPR029058 -
Trre1g05488 332 Pfam alpha/beta hydrolase fold 83 308 IPR013094 GO:0016787
Trre1g05488 332 SUPERFAMILY alpha/beta-Hydrolases 16 327 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05488 Trre-Chr1 60421541 60422539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05488 19 323 Carbohydrate Esterase AT5G16080 33.438 1.21e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05488 - - gmx:100777786 465.307