Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05476 ATGGCTATCAAATTACCAGCAGAAAACACTTTTCCAATCATTTTCCTCCTTTTAACATTATTTTCATTATCTAAAGCTGAACTTTATGCTCATTACTATGACCAAACATGTCCACAATTGGAAAAAATAATTTCAGAGACAGTTCTTAATGCTTCTATCCATGATCCAAAAGTCCCGGCTCGTATTTTGAGGATGTTTTTCCATGACTGTTTCATAAGGGGTTGTGATGCATCGATATTGCTGGACTCAACTACCAGTAACCAAGCAGAGAAAGACGGCCCTCCTAATGTCTCAGTTCGATCGTTCTATGTAATTGATGAGGCTAAAGCAAAGCTTGAGTTGGCTTGCCCACACACTGTTTCTTGTGCTGATATACTAGCTATTTTAGCAAGAGATGTGGTGGCCATGTCTGGAGGTCCATATTGGAAAGTACTAAAAGGAAGGAAAGATGGAAGGGTATCAAAGGCATCTGATACCAGCAACCTACCGGCCCCAACCTTGAATGTAGGTCAACTCATTCAGAGCTTTGCTAAGAGAGGGTTGGGAGTTAAAGATATGGTGACTTTATCTGGAGGACACACTTTGGGCTTCTCACATTGTTCTTCCTTTGAGTCTCGTCTTCATAATTTCAGTTCATTGCATGATATTGATCCAAGGTTGAACACTGAATTTGCACTAGACCTAAGCAAGAAATGTCCAAAACCAAACAACAACCCAAATGCAGGACAATTCCTGGACTCAACAGCATCAGTGTTTGATAATGACTATTACAAACGACTACTGGCTGGAAAAGGTGTGTTTTCCTCCGATCAGTCACTAGTTGGTGATTACAGAACTAGATGGATTGTTGAAGCATTTGCAAGAGACCAGACTTTGTTTTTCAAAGAGTTTGCAGCTTCAATGCTGAAACTCGGAAATATAAGAGGCTCTGATAATGGAGAAGTGAGACGTAATTGCAGGATTGTGAATTGA 972 0.4023 MAIKLPAENTFPIIFLLLTLFSLSKAELYAHYYDQTCPQLEKIISETVLNASIHDPKVPARILRMFFHDCFIRGCDASILLDSTTSNQAEKDGPPNVSVRSFYVIDEAKAKLELACPHTVSCADILAILARDVVAMSGGPYWKVLKGRKDGRVSKASDTSNLPAPTLNVGQLIQSFAKRGLGVKDMVTLSGGHTLGFSHCSSFESRLHNFSSLHDIDPRLNTEFALDLSKKCPKPNNNPNAGQFLDSTASVFDNDYYKRLLAGKGVFSSDQSLVGDYRTRWIVEAFARDQTLFFKEFAASMLKLGNIRGSDNGEVRRNCRIVN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05476 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Trre1g05476 323 PANTHER PEROXIDASE 25-RELATED 19 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 Gene3D - 31 323 - -
Trre1g05476 323 FunFam Peroxidase 163 304 - -
Trre1g05476 323 Gene3D Peroxidase, domain 2 163 304 - -
Trre1g05476 323 SUPERFAMILY Heme-dependent peroxidases 28 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 ProSiteProfiles Plant heme peroxidase family profile. 27 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 Pfam Peroxidase 50 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g05476 323 CDD secretory_peroxidase 27 322 IPR033905 GO:0004601|GO:0042744
Trre1g05476 323 FunFam Peroxidase 31 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05476 Trre-Chr1 60281512 60282958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05476 11 323 Peroxidase AT5G51890 71.338 4.46e-171 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05476 K00430 - gmx:100799516 545.428