Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05314 ATGGCTTCTTTATTTAGGTGTTATTGGGTTAGTGTTGTTACTATGTTCCTATGTTGTTTTTGTAGTTGCATTTCAAGTGAGATTGGGTTAGGGTCAAGATTATTGGCTAGTAAAGACCAAGTTTGGGTTTCTGATAATGGTACATTTGCTATGGGATTCACTCCATCAAATACTGATAATCATTTGTTCACTTTGGGTATTTGGTTTGCTAGGCTTCCAGGAGATAGAACTTTTGTTTGGTCACCTAATAGAAACTCTCCTACATCACAAGAAGCAATTTTGGAGCTTGACACCACAGGAAACCTCATTCTCATGGACAAAAAAATCACCATATGGGCCTCAAATACCTCAAATGCTAATGTAGAATCAGCAACAATGTCAGAATCAGGAAACTTCATCCTTCACAACACAAACAATCATCCTATATGGCAGAGTTTTTCTCAACCTTCTGATACACTCCTTCCAAACCAGCCTCTAACAGTTTCTTCAGAACTAATATCACAAAAATCTTCTTCTCATGGTGGATACTATGCTCTCAAAATGCTTCAACAACCAACTTCCTTAAGTCTTGCACTAACTTACAATCTTCCAGAAACTTACCAATCTTTGTATGAAAATGAATCATCATACACAAACTATTCTTATTGGCAAGGTCCTGAGATTTCGAATGTAACCGGTGAAGTTATCGCGGTTTTAGATCAAGCTGGAAGCTTTGGAATTGTATATGGAGATTCATCTGATGGCGCGGTTTATGTTTATAAGAATGATAATGATGATGCAGGTTTAGCTTCTGCTATTCATCAATCTACGCCATCAACCGTTCTTAGGAGACTAACACTCGAAGAGAACGGAAATCTGCGATTGTATCGTTGGGAAGACATAAATGGATCGAAACAATGGGTGTCACAATGGGCCGCAGTTTCAAATCCGTGTGATATTGGTGGAATTTGTGGTAATGGTGTTTGTAAATTGGATAGAACTAAGACTAATGCATCTTGCACTTGTTTACCAGGAACTTCTAAAGTTGGTAGAGATGGAGAATGTTATGAGAATTCATCACTTGTTGGAAAATGTACTAATGGTAAAAATGAAAACATGACATCACAGTTTAGAATATCAATGGTTCAACAAACTAATTACTATTTTTCTGAATCTTCAATAATAGCTAATTATAGCGAGAATGATGTTTCTTCGGTATCAAAATGTGGTGATGCATGTTTATCGGATTGTGATTGTGTTGCTTCTGTTTATGGACTAAATGAAGAAAGACCATTTTGTTGGGTTTTGAGGAGTTTAAGTTTCGGCGGTTTTGAAGATACAAGTTCTACTTTGTTTGTGAAAGTTAGAGCGAATAGTTCATGGACACAAGGACAAGAAGGAAAGTCTAATAGTTCTTCCGACGGAATGGGGAGTGCTAAGGAAAAAGCTGTGATTATTCCAATTGTTTTAGGAATGGTAGTGCTCATATTTTTGCTATGTATGTTACTTTATTACAGTGTTCACAGAAAAAGAACTTTGAAAAGAGAAATGGAAAGTTCAATGGCCTTATCAGGTGCTCCAATGAATTTTACTTACCGCGCTTTGCAAATCAGGACGAGCAACTTTTCGCAACTTCTAGGAACAGGTGGATTTGGAAGTGTGTATAAAGGTAGCCTAGGTGATGGTACCCTAGTGGCAGTGAAAAAACTTGATAAGATTTTGCCTCATGGAGAAAAAGAATTTATCACTGAAGTAAACACAATTGGATCAATGCATCATATGAATTTGGTTCGTCTATGCGGATTTTGTTCAGAGGGACCACACAGGCTTTTGGTTTATGAGTACATGAAGAATGGCTCGTTGGATAAATGGATCTTCCCTTCGTATAGAGGGCGAGATAGAATATTAGATTGGCAAACTCGCTTGGATATCGCCATAAATACTGCACAAGGGATTGCATACTTTCATGAGCAGTGCAGAAATAGGATCATACATTGTGACATCAAACCAGAAAATATTTTGTTAGATGAAAACTTCTGTCCTAAGGTATCTGATTTTGGACTTGCCAAATTGATGGCAAGGGAACACTCTCATGTGGTAACAATGGTTAGAGGCACTAGAGGTTATTTGGCACCAGAATGGATTAGTAATCGACCTATAACCGTAAAAGCAGATGTTTACAGCTATGGTATGCTTCTTTTAGAAATCATTGGTGGCAGGAGAAATCTTGACTTATCCTTTGATGCAGAAGATTTCTTCTATCCTGGTTGGGCTTATAAGGAGATGACAAATGGATCAACAATCAAAGTGGCAGATAGAAGATTAAATGGTGCAGTTGATGAAGAAGAGCTAATTAGAGCTTTGAAAATTGCCTTTTGGTGCATACAAGATGATGTTTCAATGAGACCACCAATGGGAGAAGTGGTGAGAATGCTAGAAGAACAAGGTTCAAATAGCATAAATATAAATATGCCACCAATGCCACAAACAGTATTAGAGGTAATTGAAGAAGGGTTGGACCATGTTTACAAAGCTATGAAAAGAGAGTATAACCATTATAGTTCATTCACTATTACTAGTCATCTTACATCTCATGCCACATGCAGCAATTCCACAATGTCACCAAGATAG 2610 0.3743 MASLFRCYWVSVVTMFLCCFCSCISSEIGLGSRLLASKDQVWVSDNGTFAMGFTPSNTDNHLFTLGIWFARLPGDRTFVWSPNRNSPTSQEAILELDTTGNLILMDKKITIWASNTSNANVESATMSESGNFILHNTNNHPIWQSFSQPSDTLLPNQPLTVSSELISQKSSSHGGYYALKMLQQPTSLSLALTYNLPETYQSLYENESSYTNYSYWQGPEISNVTGEVIAVLDQAGSFGIVYGDSSDGAVYVYKNDNDDAGLASAIHQSTPSTVLRRLTLEENGNLRLYRWEDINGSKQWVSQWAAVSNPCDIGGICGNGVCKLDRTKTNASCTCLPGTSKVGRDGECYENSSLVGKCTNGKNENMTSQFRISMVQQTNYYFSESSIIANYSENDVSSVSKCGDACLSDCDCVASVYGLNEERPFCWVLRSLSFGGFEDTSSTLFVKVRANSSWTQGQEGKSNSSSDGMGSAKEKAVIIPIVLGMVVLIFLLCMLLYYSVHRKRTLKREMESSMALSGAPMNFTYRALQIRTSNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDKILPHGEKEFITEVNTIGSMHHMNLVRLCGFCSEGPHRLLVYEYMKNGSLDKWIFPSYRGRDRILDWQTRLDIAINTAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMAREHSHVVTMVRGTRGYLAPEWISNRPITVKADVYSYGMLLLEIIGGRRNLDLSFDAEDFFYPGWAYKEMTNGSTIKVADRRLNGAVDEEELIRALKIAFWCIQDDVSMRPPMGEVVRMLEEQGSNSININMPPMPQTVLEVIEEGLDHVYKAMKREYNHYSSFTITSHLTSHATCSNSTMSPR 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05314 869 FunFam Serine/threonine-protein kinase 29 147 - -
Trre1g05314 869 SUPERFAMILY Protein kinase-like (PK-like) 511 806 IPR011009 -
Trre1g05314 869 Pfam D-mannose binding lectin 77 163 IPR001480 -
Trre1g05314 869 Pfam Protein kinase domain 536 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05314 869 SMART serkin_6 533 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05314 869 PANTHER OS07G0415500 PROTEIN 12 821 - -
Trre1g05314 869 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Trre1g05314 869 Gene3D Transferase(Phosphotransferase) domain 1 609 817 - -
Trre1g05314 869 Pfam S-locus glycoprotein domain 254 339 IPR000858 GO:0048544
Trre1g05314 869 CDD STKc_IRAK 539 807 - -
Trre1g05314 869 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 609 816 - -
Trre1g05314 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Trre1g05314 869 ProSitePatterns Protein kinases ATP-binding region signature. 539 562 IPR017441 GO:0005524
Trre1g05314 869 Gene3D Phosphorylase Kinase; domain 1 497 608 - -
Trre1g05314 869 CDD B_lectin 37 149 IPR001480 -
Trre1g05314 869 ProSiteProfiles Protein kinase domain profile. 533 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g05314 869 SMART blect_4 33 149 IPR001480 -
Trre1g05314 869 FunFam serine/threonine-protein kinase PBS1-like 501 608 - -
Trre1g05314 869 Gene3D - 25 148 IPR036426 -
Trre1g05314 869 PIRSF SRK 1 860 IPR024171 GO:0004674
Trre1g05314 869 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 151 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05314 Trre-Chr1 59033949 59037673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05314 504 819 Receptor kinase-like Gene Family AT5G20050 44.242 3.75e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre1g05314 Pkinase 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05314 - - tpra:123904109 1677.92