Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre1g05314 | ATGGCTTCTTTATTTAGGTGTTATTGGGTTAGTGTTGTTACTATGTTCCTATGTTGTTTTTGTAGTTGCATTTCAAGTGAGATTGGGTTAGGGTCAAGATTATTGGCTAGTAAAGACCAAGTTTGGGTTTCTGATAATGGTACATTTGCTATGGGATTCACTCCATCAAATACTGATAATCATTTGTTCACTTTGGGTATTTGGTTTGCTAGGCTTCCAGGAGATAGAACTTTTGTTTGGTCACCTAATAGAAACTCTCCTACATCACAAGAAGCAATTTTGGAGCTTGACACCACAGGAAACCTCATTCTCATGGACAAAAAAATCACCATATGGGCCTCAAATACCTCAAATGCTAATGTAGAATCAGCAACAATGTCAGAATCAGGAAACTTCATCCTTCACAACACAAACAATCATCCTATATGGCAGAGTTTTTCTCAACCTTCTGATACACTCCTTCCAAACCAGCCTCTAACAGTTTCTTCAGAACTAATATCACAAAAATCTTCTTCTCATGGTGGATACTATGCTCTCAAAATGCTTCAACAACCAACTTCCTTAAGTCTTGCACTAACTTACAATCTTCCAGAAACTTACCAATCTTTGTATGAAAATGAATCATCATACACAAACTATTCTTATTGGCAAGGTCCTGAGATTTCGAATGTAACCGGTGAAGTTATCGCGGTTTTAGATCAAGCTGGAAGCTTTGGAATTGTATATGGAGATTCATCTGATGGCGCGGTTTATGTTTATAAGAATGATAATGATGATGCAGGTTTAGCTTCTGCTATTCATCAATCTACGCCATCAACCGTTCTTAGGAGACTAACACTCGAAGAGAACGGAAATCTGCGATTGTATCGTTGGGAAGACATAAATGGATCGAAACAATGGGTGTCACAATGGGCCGCAGTTTCAAATCCGTGTGATATTGGTGGAATTTGTGGTAATGGTGTTTGTAAATTGGATAGAACTAAGACTAATGCATCTTGCACTTGTTTACCAGGAACTTCTAAAGTTGGTAGAGATGGAGAATGTTATGAGAATTCATCACTTGTTGGAAAATGTACTAATGGTAAAAATGAAAACATGACATCACAGTTTAGAATATCAATGGTTCAACAAACTAATTACTATTTTTCTGAATCTTCAATAATAGCTAATTATAGCGAGAATGATGTTTCTTCGGTATCAAAATGTGGTGATGCATGTTTATCGGATTGTGATTGTGTTGCTTCTGTTTATGGACTAAATGAAGAAAGACCATTTTGTTGGGTTTTGAGGAGTTTAAGTTTCGGCGGTTTTGAAGATACAAGTTCTACTTTGTTTGTGAAAGTTAGAGCGAATAGTTCATGGACACAAGGACAAGAAGGAAAGTCTAATAGTTCTTCCGACGGAATGGGGAGTGCTAAGGAAAAAGCTGTGATTATTCCAATTGTTTTAGGAATGGTAGTGCTCATATTTTTGCTATGTATGTTACTTTATTACAGTGTTCACAGAAAAAGAACTTTGAAAAGAGAAATGGAAAGTTCAATGGCCTTATCAGGTGCTCCAATGAATTTTACTTACCGCGCTTTGCAAATCAGGACGAGCAACTTTTCGCAACTTCTAGGAACAGGTGGATTTGGAAGTGTGTATAAAGGTAGCCTAGGTGATGGTACCCTAGTGGCAGTGAAAAAACTTGATAAGATTTTGCCTCATGGAGAAAAAGAATTTATCACTGAAGTAAACACAATTGGATCAATGCATCATATGAATTTGGTTCGTCTATGCGGATTTTGTTCAGAGGGACCACACAGGCTTTTGGTTTATGAGTACATGAAGAATGGCTCGTTGGATAAATGGATCTTCCCTTCGTATAGAGGGCGAGATAGAATATTAGATTGGCAAACTCGCTTGGATATCGCCATAAATACTGCACAAGGGATTGCATACTTTCATGAGCAGTGCAGAAATAGGATCATACATTGTGACATCAAACCAGAAAATATTTTGTTAGATGAAAACTTCTGTCCTAAGGTATCTGATTTTGGACTTGCCAAATTGATGGCAAGGGAACACTCTCATGTGGTAACAATGGTTAGAGGCACTAGAGGTTATTTGGCACCAGAATGGATTAGTAATCGACCTATAACCGTAAAAGCAGATGTTTACAGCTATGGTATGCTTCTTTTAGAAATCATTGGTGGCAGGAGAAATCTTGACTTATCCTTTGATGCAGAAGATTTCTTCTATCCTGGTTGGGCTTATAAGGAGATGACAAATGGATCAACAATCAAAGTGGCAGATAGAAGATTAAATGGTGCAGTTGATGAAGAAGAGCTAATTAGAGCTTTGAAAATTGCCTTTTGGTGCATACAAGATGATGTTTCAATGAGACCACCAATGGGAGAAGTGGTGAGAATGCTAGAAGAACAAGGTTCAAATAGCATAAATATAAATATGCCACCAATGCCACAAACAGTATTAGAGGTAATTGAAGAAGGGTTGGACCATGTTTACAAAGCTATGAAAAGAGAGTATAACCATTATAGTTCATTCACTATTACTAGTCATCTTACATCTCATGCCACATGCAGCAATTCCACAATGTCACCAAGATAG | 2610 | 0.3743 | MASLFRCYWVSVVTMFLCCFCSCISSEIGLGSRLLASKDQVWVSDNGTFAMGFTPSNTDNHLFTLGIWFARLPGDRTFVWSPNRNSPTSQEAILELDTTGNLILMDKKITIWASNTSNANVESATMSESGNFILHNTNNHPIWQSFSQPSDTLLPNQPLTVSSELISQKSSSHGGYYALKMLQQPTSLSLALTYNLPETYQSLYENESSYTNYSYWQGPEISNVTGEVIAVLDQAGSFGIVYGDSSDGAVYVYKNDNDDAGLASAIHQSTPSTVLRRLTLEENGNLRLYRWEDINGSKQWVSQWAAVSNPCDIGGICGNGVCKLDRTKTNASCTCLPGTSKVGRDGECYENSSLVGKCTNGKNENMTSQFRISMVQQTNYYFSESSIIANYSENDVSSVSKCGDACLSDCDCVASVYGLNEERPFCWVLRSLSFGGFEDTSSTLFVKVRANSSWTQGQEGKSNSSSDGMGSAKEKAVIIPIVLGMVVLIFLLCMLLYYSVHRKRTLKREMESSMALSGAPMNFTYRALQIRTSNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDKILPHGEKEFITEVNTIGSMHHMNLVRLCGFCSEGPHRLLVYEYMKNGSLDKWIFPSYRGRDRILDWQTRLDIAINTAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMAREHSHVVTMVRGTRGYLAPEWISNRPITVKADVYSYGMLLLEIIGGRRNLDLSFDAEDFFYPGWAYKEMTNGSTIKVADRRLNGAVDEEELIRALKIAFWCIQDDVSMRPPMGEVVRMLEEQGSNSININMPPMPQTVLEVIEEGLDHVYKAMKREYNHYSSFTITSHLTSHATCSNSTMSPR | 869 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre1g05314 | 869 | FunFam | Serine/threonine-protein kinase | 29 | 147 | - | - | |
Trre1g05314 | 869 | SUPERFAMILY | Protein kinase-like (PK-like) | 511 | 806 | IPR011009 | - | |
Trre1g05314 | 869 | Pfam | D-mannose binding lectin | 77 | 163 | IPR001480 | - | |
Trre1g05314 | 869 | Pfam | Protein kinase domain | 536 | 739 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre1g05314 | 869 | SMART | serkin_6 | 533 | 805 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre1g05314 | 869 | PANTHER | OS07G0415500 PROTEIN | 12 | 821 | - | - | |
Trre1g05314 | 869 | ProSiteProfiles | Bulb-type lectin domain profile. | 26 | 147 | IPR001480 | - | |
Trre1g05314 | 869 | Gene3D | Transferase(Phosphotransferase) domain 1 | 609 | 817 | - | - | |
Trre1g05314 | 869 | Pfam | S-locus glycoprotein domain | 254 | 339 | IPR000858 | GO:0048544 | |
Trre1g05314 | 869 | CDD | STKc_IRAK | 539 | 807 | - | - | |
Trre1g05314 | 869 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 609 | 816 | - | - | |
Trre1g05314 | 869 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 656 | 668 | IPR008271 | GO:0004672|GO:0006468 | |
Trre1g05314 | 869 | ProSitePatterns | Protein kinases ATP-binding region signature. | 539 | 562 | IPR017441 | GO:0005524 | |
Trre1g05314 | 869 | Gene3D | Phosphorylase Kinase; domain 1 | 497 | 608 | - | - | |
Trre1g05314 | 869 | CDD | B_lectin | 37 | 149 | IPR001480 | - | |
Trre1g05314 | 869 | ProSiteProfiles | Protein kinase domain profile. | 533 | 813 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre1g05314 | 869 | SMART | blect_4 | 33 | 149 | IPR001480 | - | |
Trre1g05314 | 869 | FunFam | serine/threonine-protein kinase PBS1-like | 501 | 608 | - | - | |
Trre1g05314 | 869 | Gene3D | - | 25 | 148 | IPR036426 | - | |
Trre1g05314 | 869 | PIRSF | SRK | 1 | 860 | IPR024171 | GO:0004674 | |
Trre1g05314 | 869 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 77 | 151 | IPR036426 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre1g05314 | Trre-Chr1 | 59033949 | 59037673 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre1g05314 | 504 | 819 | Receptor kinase-like Gene Family | AT5G20050 | 44.242 | 3.75e-77 | 256 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Trre1g05314 | Pkinase | 3.2e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre1g05314 | - | - | tpra:123904109 | 1677.92 |