Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05286 ATGATTTGTAAGCCTTTTCTGATAAAAAGATCGACAAGCTTGTTCGATCAGAGCCATGGTAAAGTGGCTATATATCAAAGTAGTGTTCATGGAAATCATTATGCAATTAAGTCCTTTCATAAGTCTCACTTAAGGAAGCTTCGAGTTGCTCCATCTGAGACTTCCATGACTGATGTTCTACATGACGAGCGCAAGAATACATGCATAGAGACCGGAGACTTTCTCTTGGCAGATGCAGACATCAAGAAATCTCTTGAGCTGCATCCACAAAATAGGGAGGTAAAGGTAATGAAGATGAAATTGAAGCAACTTCAAGCTGACGGCGACAAAAAAGATGCTAAACTGTATGAAAATATGTTTGCAAGTAAACCAAAGGTGGTTGAAATTGGCAAAGGAAGCTAG 402 0.393 MICKPFLIKRSTSLFDQSHGKVAIYQSSVHGNHYAIKSFHKSHLRKLRVAPSETSMTDVLHDERKNTCIETGDFLLADADIKKSLELHPQNREVKVMKMKLKQLQADGDKKDAKLYENMFASKPKVVEIGKGS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05286 133 Gene3D Tetratricopeptide repeat domain 35 121 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05286 Trre-Chr1 58888337 58890863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05286 64 133 Calmodulin-binding Proteins AT5G48570 45.714 1.91e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05286 K00908 - psat:127078679 100.523