Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05276 ATGGAGAGTCTACAAGGAATCAACATGGCAATGACATATATTCATGAAGCAAGGGAAGAGAGACATGAAAATATTCACGAAGAGAACATTAATAGTCTAACTAATCTTGCAATCACCCAATACATTGGAGAAACAGATGCCAATTTAAATGCACAAATTACTCGCTATGTGGATACTATAACCAACAACAACTTACGTAACTTAGGTTACCCCACTAATCAAGACTTCAATTATGACGCATTGGCACCTTTGGTTCATTTTCATTTGAACAATGCTGGAGATCCATTTCTTGGAAGCAGTTTCTCTCTAAATTCAATGACATTTGAAGTTAGTGTGCTTGATTGGTTTGCTAAACTATGGGAGATAGAGAAGAATGAGTATTGGGGATACGTCACATCTGGTGGAACCGAAGGCAATCTTCAAGGAATTTTAGTAGGGAGAGAAAAATTTCCAGATGGAATTCTATATACCTCAGAAGATTCACATTATTCAATACCCAAAATAGCAAGAATGTATCGAATGCAATGTGTTAAGGTTGGCTCTTTAATCTCCGGTGAAATTGATTGTGTTGACTTGGAAGCTTCTCTACTTGCCAACAAGGACAAACCAGCCATCATCAATTTAAACATAGGGACAACTTTGAAAGGAGCTATTGATGATATTGATCTTGTAATTGAAACACTTTACAAATGTGGTTTTACTCGTGATCGATTCTACATTCATTGCGACGGTGCTCTATTTGGAATCATGTTGCCTTTTATCGATCAAGCTCCAAGGATTAGCTTCAAGAAACCTATCGACAGTGTAACTATTTCAGGTCATAAGTTTTTGGGATGTCCTTCACCTTGTGGTGTTTTGATAACTCGTTTGAAATACATCGATGCCCTCTCGAGAGAATGTGGTATCATTGCTTCAAGGGATGCTACAATCACAGGCAGCCGTAGCGGGCATTCTCCAATCTTAATGTGGTATGCTCTAAAAAAAAAAGGTTTAATAGGACTTGGAAATGAAGTGAATAATTGTATGATGAAATCACGTTACTTACTAAACAAACTACGTGATGCTGGAATTGGTGCAATGTTAAATGAATTTAGCAACATAGTTGTATTTGAGAGACCCCATGATGATCAATTTACCCGTAGATGGAATTTGGCTAGCAATGAAAATATTGCACATGTGGTTGTGTTGAAGCATGTTACTATTGAAATTCTTGACACATTTGTTAGTGAATTTGTCCAAAATCGATTGATTTGGTTTAAATATGGACAATTTCAGCCTCTATGCATTGCAAAAGACGTTGGTTCTAGAAATTGTGCTTGTTCCGTACACAACTTATCTGGAAATTATCAGCTAAATTGTATGTGA 1365 0.367 MESLQGINMAMTYIHEAREERHENIHEENINSLTNLAITQYIGETDANLNAQITRYVDTITNNNLRNLGYPTNQDFNYDALAPLVHFHLNNAGDPFLGSSFSLNSMTFEVSVLDWFAKLWEIEKNEYWGYVTSGGTEGNLQGILVGREKFPDGILYTSEDSHYSIPKIARMYRMQCVKVGSLISGEIDCVDLEASLLANKDKPAIINLNIGTTLKGAIDDIDLVIETLYKCGFTRDRFYIHCDGALFGIMLPFIDQAPRISFKKPIDSVTISGHKFLGCPSPCGVLITRLKYIDALSRECGIIASRDATITGSRSGHSPILMWYALKKKGLIGLGNEVNNCMMKSRYLLNKLRDAGIGAMLNEFSNIVVFERPHDDQFTRRWNLASNENIAHVVVLKHVTIEILDTFVSEFVQNRLIWFKYGQFQPLCIAKDVGSRNCACSVHNLSGNYQLNCM 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05276 454 SUPERFAMILY PLP-dependent transferases 67 412 IPR015424 -
Trre1g05276 454 Gene3D - 85 327 IPR015421 GO:0003824
Trre1g05276 454 PANTHER - 16 444 - -
Trre1g05276 454 Pfam Pyridoxal-dependent decarboxylase conserved domain 106 357 IPR002129 GO:0016830|GO:0019752|GO:0030170
Trre1g05276 454 Gene3D Aspartate Aminotransferase, domain 1 328 414 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05276 Trre-Chr1 58703129 58705683 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05276 210 351 Calmodulin-binding Proteins AT2G02010 28.571 2.06e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05276 K25193 - gmx:100781665 648.277