Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05275 ATGGAGATTGAACAGATCTTCATCGGAGCTCTGCCGGAGACGGCAGAGAATCAACACACATCTGATAATAATAATATCAACTTTGATGAATTGGAAAACTTTATTGATATCGATTTTGAGATTTCCAACAACGCATTACCAATTTTGACACCACCACCAAAAACAATTGAGATGCCGAGTGTTTCAATTCCTGCAGCGGCGGAGCCGCCACATAATGCAATCATATATGAGCAATCTAGTAACGTCAATGTGACACAAATGATTAGTGGCAGGGTTGATGGTGGCAAAAACGGCTCCGGAGAGAGAGTGATAGAGCAACACCGTGACAAAAATTGTATTTGTCATGGTGGATCTTCAAGATCGTTGTCTTTTTATAAGAAAAGGATGTTTTATTCTCCTGAAAAGTTAGCAGAAATTGCACGAACCGATCCTAGAGAAGCGCAAAGGATTGTTGCTAGAAGGAACGCTGTTAAAAAATCAAAGGAGAGGAAAAGGAATTATATAAATGAGTTGGAAAAGAATGTGAAATCACTTCAGATTCAAGCGGATAATGCAACTGCACAGCGTGTCAATGCAAAGAATGAAGCTTCAACTTTAGCTAATGGTAACAAGCAAATCAAAGAGTCCATACAATTTATGATACAACATCAAGAAATGCAAAAGGCTTTCATCAAATCATTAAAGGAACAAATACATATGGTTAAGATACAAATTGAAGGACAAACTACAGCTATGATGAATTCTTCTTTTGGTGAACTGCCGTCCTCTCAATTCCAGCTTCAGGCTCCTCGCCAGTCACCAGCCACAACTCTGTACATGCCGCCGTCGCCGGCTCTAGTTCCTACTCCATCAACTCCCTTTGGTCAGCCTCTAAGTGATCATTTTATTATCACCAACTCTTATAATTTCAATCCATTGAACTAG 924 0.3961 MEIEQIFIGALPETAENQHTSDNNNINFDELENFIDIDFEISNNALPILTPPPKTIEMPSVSIPAAAEPPHNAIIYEQSSNVNVTQMISGRVDGGKNGSGERVIEQHRDKNCICHGGSSRSLSFYKKRMFYSPEKLAEIARTDPREAQRIVARRNAVKKSKERKRNYINELEKNVKSLQIQADNATAQRVNAKNEASTLANGNKQIKESIQFMIQHQEMQKAFIKSLKEQIHMVKIQIEGQTTAMMNSSFGELPSSQFQLQAPRQSPATTLYMPPSPALVPTPSTPFGQPLSDHFIITNSYNFNPLN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05275 307 Coils Coil 154 195 - -
Trre1g05275 307 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 82 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05275 Trre-Chr1 58700312 58702057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05275 95 236 bZIP Transcription Factor Family AT2G40620 33.099 1.07e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05275 - K20557 tpra:123913363 401.364