Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05265 ATGGAGAACAATAAACTAACACGCGACGTCGAGAATCCTCCGATGATGAAGTCTCCGGTCACCGATGAGGATGGAGATAATAATGGTGTGAAAGTAGTTTGTCCAATGCCACAGCAAGATGATAAAGTTTCTGAATTAGGTTCAAGGGAAAAGGAGGGAGAAGGTGAGACTGTTGAATCAGCCGCGGCAAAAAAGAAGAGAAAAAAGAAGGAAAGAGAAAAGGAGAAGAAGGCGGCAGCAGCAGCGGCCGGAAGTGCAGCGGTTATTGAAACTGAGACAAGTGAACAGAAGAAAATTTATTCGAAGACGAACAAGAAAGTGCCGAAGCATGTTAGGGAGATGCAAGAACTATTGGCTCGAAGAAAAGAGGATGAAGAGAGAAAGAAAAGAGAAGAGGAAGAGAGGCTAAGGAAAGAAGAAGAGGAGAGACAAAGGCTAGAGGAACTTGAGAGACAGGAAGAAGAGGCTAAACGTATGAAGAAGGAAAAGGAAAAACAAAAACTTCTGAAAAAGAAGCAAGAAGGTAAATTGTTAACTGATAAGCAGAAACAAGAAGCTCGACGTTTGGAGGCAATGAGGAGGCAGATTCTCAATGGTATAGGAGGTTTGAATATTCCTGTTGTGGAGGACACTGGTGCACCGGCTAAAAAACCCGTTTATCAGACAAGGACGGGGAGATCAACTAATCGAAATCATAATTGTGAAGCTTCTGTCAAGACAGATGAAGTCGTGAGGCAAAGGAAACTATAA 750 0.428 MENNKLTRDVENPPMMKSPVTDEDGDNNGVKVVCPMPQQDDKVSELGSREKEGEGETVESAAAKKKRKKKEREKEKKAAAAAAGSAAVIETETSEQKKIYSKTNKKVPKHVREMQELLARRKEDEERKKREEEERLRKEEEERQRLEELERQEEEAKRMKKEKEKQKLLKKKQEGKLLTDKQKQEARRLEAMRRQILNGIGGLNIPVVEDTGAPAKKPVYQTRTGRSTNRNHNCEASVKTDEVVRQRKL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05265 249 MobiDBLite consensus disorder prediction 1 186 - -
Trre1g05265 249 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 57 236 IPR015760 -
Trre1g05265 249 MobiDBLite consensus disorder prediction 43 66 - -
Trre1g05265 249 MobiDBLite consensus disorder prediction 235 249 - -
Trre1g05265 249 Coils Coil 111 176 - -
Trre1g05265 249 MobiDBLite consensus disorder prediction 204 249 - -
Trre1g05265 249 Coils Coil 58 78 - -
Trre1g05265 249 MobiDBLite consensus disorder prediction 95 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05265 Trre-Chr1 58608624 58609373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05265 47 220 Eukaryotic Initiation Factors Gene Family AT1G21160 45.977 2.51e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05265 K03243 - gmx:100814875 118.627