Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05177 ATGACCATGCATTCTCACATAGACAGAATCCTTTGGACCGAAGACCAAATCTCTCTCCGAATCTCCCAAATCGCCACCCAAATTGTTCACGACTTTTCCGCTCCTTCACCTCCTCCCATCTTTATTGGCGTTCTCACCGGCGCATTCACCTTCCTCGCTGACCTAGTTCGTAAAATTAACCTCCCCGTTACTATTGATTTTGTCAGTTCTAAATCATATGGTTCCGGAACTGTCTCCAACTGCGCTCCCACCATTTCTCGTGACTTGAATGTTGACATTAACGGCCGCCACGTCATATTGGTTGAAGACATTGTAGATACAGGACATACTTTATATAAACTCATTGCACACATGAAGTCAAAAGGAGCATCCTCTGTATCCGTATGCACTCTACTTGACAAACCAGCAAGAAGGAAAGTTAATGTACAGCTTGTGGGTGAAGGAAAATTCTATCGGGGATTTGAGTGTCCAGACAATTTTGTTGTTGGTTATGGAATGGATTTTGACGAATTGTACAGAAATCTACCTTATATTGGTGTCTTGAAACCTGAACATTACAGTTGA 564 0.4255 MTMHSHIDRILWTEDQISLRISQIATQIVHDFSAPSPPPIFIGVLTGAFTFLADLVRKINLPVTIDFVSSKSYGSGTVSNCAPTISRDLNVDINGRHVILVEDIVDTGHTLYKLIAHMKSKGASSVSVCTLLDKPARRKVNVQLVGEGKFYRGFECPDNFVVGYGMDFDELYRNLPYIGVLKPEHYS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05177 187 Gene3D - 2 187 IPR029057 -
Trre1g05177 187 SUPERFAMILY PRTase-like 2 186 IPR029057 -
Trre1g05177 187 Pfam Phosphoribosyl transferase domain 20 168 IPR000836 -
Trre1g05177 187 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 3 186 - -
Trre1g05177 187 CDD PRTases_typeI 21 139 IPR000836 -
Trre1g05177 187 NCBIfam hypoxanthine phosphoribosyltransferase 10 182 IPR005904 GO:0004422|GO:0006166
Trre1g05177 187 FunFam Hypoxanthine phosphoribosyltransferase 2 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05177 Trre-Chr1 57871954 57874076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05177 1 186 PRT Gene Family AT1G71750 60.406 3.58e-83 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05177 K00760 - gmx:100037484 283.878