Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05148 ATGGAGATTCACTTCTTTCTATTATTTGCCACTCTATTTTTAATCATAATAATCCGGTTCTTTTTAAACCGGAAAAGAAACAAACCGCCCGGTCCAACCGGTTTACCCATAATCGGAAACCTCCATCAACTAGGCTCCGAACCTCACTGTACCCTCTCTTCCCTCGCTAAAACCTATGGCCCAATCATGTCCCTCCGTTTCGGCTCCGTCACCGTAACCGTCGCCTCCTCCCCTACAACCGCCCAAGAAATTCTCCAAAAAAACGACCAATCCTTCGCCAACCGCCCTATCCCTGAATCAGTCGCTGCTCAACCAAACGTCAACGACACTCTCGCTTGGGCACCCGCCGACTCACGGTGGCGCAACCGTCGACGTATCTGCACAACTCAAATATTCACATCCCAACGCCTTGACCTCCTCCAACATCTCCGTCACCGGAAAGTTGAGCAACTAGTTCAACACCTTCACAAAAAAGCTGCTGAAAAAACAACAGTTGATATAGGTGAACTTGCTTTTGCTACCATGTTGAACTTGGTTTCTAACACGGTGTTTTCTGAGGATCTTGTTGACGCAGAATTTGAGAGTGCTGGTGAATTTAAGGAGCTTGTGTGGAGAATTATGGAAGATGCTGGGAAAGTGAATGTTAGTGATTATTTTCCTGTGTTGAAGAGATTTGATTTGCAGGGTGTTAAGAGACATGTTAAGGTTTCTTATGAGAGATTGCATGAGATTTTTGATCGTATGATTAAGAAACGTGTTGAAGATAGAGAGAATTTGAGTGGTGATGGTGGTGGTGATTTTTTGGATGTGTTGCTTGATCATTGTCAACAACATAAAGACTCTGTTTTTAGTGTTGAAAGCATCAAGCCATTGGTTCTGGATTTATTTATAGCTGGAAGTGACACATCAGGATCAACAACAGAATGGGCAATGGCTGAACTTCTTCGCAATCCAAATATAATGAAAAAAGCAAGAAATGAAGTGATTCAAGTAATTGACAAATCCAACCAAGTCAAAGAATCAGACATTCCAACACTTCCTTACATCCAATCAATAGTCAAAGAAACCCTTAGGCTACATCCACCTGTACCACTTCTCTTACCTTATATTGCATCAAATGATGTTGAAATCAATGGTTACACAATTCATAAAGGAAACCAAGTTTTGATAAATGCATGGTCGATTGGAAGAAACCCTGAGTATTGGGATGATCCATTGTTGTTTCGGCCCGAAAGGTTTCTCGATTCTAAGGTTGATTTTAAAGGGAGGGATTTTGAGTATTTACCTTTTGGTGCTGGAAGGAGAATTTGTCCTGGTATTCCATTGGCTAATAGGATGATTGTTTTAATGTTGGCCGCGTTGTTACATTCTTTTGAATGGGAGCTTCCTCAAGGTGTTACTCCAGAAATGCTTGATATGAGGGAGCAATATGGAATTACCTTGAAAAAACTTGTTCCTCTTTCTGCTGTTCCAATTTCAGTAGTAGTATGA 1491 0.4145 MEIHFFLLFATLFLIIIIRFFLNRKRNKPPGPTGLPIIGNLHQLGSEPHCTLSSLAKTYGPIMSLRFGSVTVTVASSPTTAQEILQKNDQSFANRPIPESVAAQPNVNDTLAWAPADSRWRNRRRICTTQIFTSQRLDLLQHLRHRKVEQLVQHLHKKAAEKTTVDIGELAFATMLNLVSNTVFSEDLVDAEFESAGEFKELVWRIMEDAGKVNVSDYFPVLKRFDLQGVKRHVKVSYERLHEIFDRMIKKRVEDRENLSGDGGGDFLDVLLDHCQQHKDSVFSVESIKPLVLDLFIAGSDTSGSTTEWAMAELLRNPNIMKKARNEVIQVIDKSNQVKESDIPTLPYIQSIVKETLRLHPPVPLLLPYIASNDVEINGYTIHKGNQVLINAWSIGRNPEYWDDPLLFRPERFLDSKVDFKGRDFEYLPFGAGRRICPGIPLANRMIVLMLAALLHSFEWELPQGVTPEMLDMREQYGITLKKLVPLSAVPISVVV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05148 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 493 - -
Trre1g05148 496 FunFam Cytochrome P450 76C4 21 490 - -
Trre1g05148 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Trre1g05148 496 SUPERFAMILY Cytochrome P450 21 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 Pfam Cytochrome P450 29 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 Gene3D Cytochrome P450 19 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05148 496 CDD CYP76-like 56 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05148 Trre-Chr1 57683718 57686572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05148 5 492 Cytochrome P450 AT2G45550 43.775 1.52e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05148 - - vra:106769993 734.947