Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05146 ATGGGTTTACCTTCATCTTCATTAGACACAAACTGGTTTATGTTTAGAACTCCAACCATACCACTTAACAATCTCCTCTTGGTGATCCTACTTGCACTATTTTCCATTTCATTTCTAAAATGGACTATCCCAAAAGGAGGTATAGCTTGGAGAAATAAAAGGAACCAAATGGGTCAAATCCATATACAAGGACCAAAAGGTCTCCCAATATTTGGCATCTTATTTGCCTTAAACCATGACTTACCTCACCGAACACTTGCATCCATAGCTTCAGCCCTATCGTCCACAAAACAACTCATGGCCTTTAGTTTAGGCTCAACCCCTGCAGTTATCACCTCAAACCCTAGCATAGCTCGCGAAATTTTGAACTCTCCACATTTTTCAAACCGTCCGATTAAACAATCCGCTAAAAGCCTTATGTTTAGTCGTGCCATTGGTTTTGCACCAAACGGCACCTATTGGCGTTCGCTACGTAGGGTTGCATCAACTCACCTTTTTTCTCCAAGGCGCATTATAGCCCACGAAGCTGGTCGTAGGCTAGATTGCACCGTCATGTTAGACTCAATAGCTTATGAACAATCCAAGCATGGATTTGTTTGTTTAAGAAAACATCTTCAAGATGCAGCTCTTAATAACGTTATGGGCACAGTTTTCGGAAGTAGACTTCACAACCGAGAACTGTGCCACGTTAAAGAGCTACATGAGATGGTTAAGGAAGGGTTTGAGCTTTTAGGAGCTTTCAATTGGTCTGATTATGTGTCATGGATTAGCTTCTTTTATGATCCTTATCATATTCGTGAAAGGTGCTTAGTTCTTGCTCCTCGAGTTAAGAAATTTGTCAAGATGATTTTGGATGAACATCGAATGGCTTCTTCGTCCAAAATGATATCTGATGACTCTGACTTTGTAGATGTTCTACTCTCTCTTGAAGGCGATGAGAAGCTCCAAGACGATGACATCATTGCCATTCTATGGGAGATGATATTTCGTGGCACCGATACAACAGCACTTCTTACTGAATGGATAATGGCAGAACTTATTTTAAACCAACAAATCCAAACAAAGCTTCTTGAAGAGCTTAACAACGTTATTGGAAACAAAAACAACGTTACAGATGCTGATGTTACAAAAATGCCATATCTCGAAGCCATTGTGAAAGAAACATTACATATGACTAACCCTATTGATCTTAGTGAGGTGCTCAAGTTATCTTGTGAGATGAAGAACCCTCTCAAAGGTGTAGCTATTCCTAGGCTTGTTTAA 1263 0.4006 MGLPSSSLDTNWFMFRTPTIPLNNLLLVILLALFSISFLKWTIPKGGIAWRNKRNQMGQIHIQGPKGLPIFGILFALNHDLPHRTLASIASALSSTKQLMAFSLGSTPAVITSNPSIAREILNSPHFSNRPIKQSAKSLMFSRAIGFAPNGTYWRSLRRVASTHLFSPRRIIAHEAGRRLDCTVMLDSIAYEQSKHGFVCLRKHLQDAALNNVMGTVFGSRLHNRELCHVKELHEMVKEGFELLGAFNWSDYVSWISFFYDPYHIRERCLVLAPRVKKFVKMILDEHRMASSSKMISDDSDFVDVLLSLEGDEKLQDDDIIAILWEMIFRGTDTTALLTEWIMAELILNQQIQTKLLEELNNVIGNKNNVTDADVTKMPYLEAIVKETLHMTNPIDLSEVLKLSCEMKNPLKGVAIPRLV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05146 420 PANTHER CYTOCHROME P450 78A7-RELATED 22 395 - -
Trre1g05146 420 Pfam Cytochrome P450 63 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05146 420 SUPERFAMILY Cytochrome P450 64 397 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05146 420 Gene3D Cytochrome P450 48 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05146 420 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05146 420 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05146 420 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05146 420 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05146 Trre-Chr1 57669826 57676774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05146 29 418 Cytochrome P450 AT5G09970 57.828 5.79e-164 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05146 K20619 - cave:132184017 506.523