Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05128 ATGGAGCCTCTTTCTTCTACCAAACAAAATAATAATAATAATAATAATAATAATAATAATTTCACTAAACCTTCTTCTCTCCATCTTGAAACTCAACAACCACTTGATGAACCCAGTCCTCTCCGTAAAATCATAGTTGTTGCCTCCATCGCCGCCGGTGTTCAATTCGGTTGGGCACTACAACTCTCTCTCTTAACTCCCTACATTCAGTTACTCGGTATTTCTCATACTTTAGCCCCTTTTATTTGGCTTTGCGGCCCAATTTCCGGTATGCTTGTCCAACCGATTGTCGGTTACAACAGCGACCGTTGCACTTCACGTTTCGGTCGTCGTCGTCCATTCATAGCCGCCGGTTCAGTCGCCGTTGCTATCGCCGTTTTCTTAATCGGTTACGCCGCTGACATCGGTCACTCGTTCGGCGATAATCTAGACAAAAAAGTCCGTCCACGTGCAATCGGAGTCTTCGTCTTCGGTTTCTGGATCCTCGACGTTGCTAACAACATGCTTCAAGGACCTTGCCGTGCACTTCTCGGCGATCTCTGTGCCGGTAACCAGCGTAAAACGAGAAACGCAAACGCGTTTTTCTCGTTTTTTATGGCCGTCGGTAATATCCTCGGTTACGCCGCCGGTTCATACAGTAAACTCTACCATATGTTTCCGTTCACGAAAACTAAAGCATGTAATACTTACTGTGCGAATCTAAAAAGCTGTTTCTTTATCTCGATCGCTTTATTAACCGTTTTAGTCACCGCAGCTTTGATTTACGTGAAAGAAAAAGCAATCACGACGGAGAAAACGGTTACCGATGAAGACGATGGTGGTAGTAGTATGAAATGTTTTGGGGAATTATCCGGTGCTTTTAGGGAACTAAAGAGACCTATGTGGATTCTATTATTAGTGACGTGTCTTAATTGGATTGCGTGGTTTCCTTTTTTGTTGTTTGATACTGATTGGATGGGGAAAGAAGTTTATGGAGGAACGGTTGGAGAAGGTACGGTGTATGATAAGGGTGTGCGTGCGGGTGCATTAGGACTTATGTTAAACTCAGTCGTTTTGGGTGTGACTTCATTGGGAGTTGATGTGTTGGCGCGTGGAGTTGGGGGCGTGAAGAGGTTATGGGGAATAGTTAACTTTGTGCTTGCAATTTGTTTGGCTATGACGGTTTTAGTTACTAAATTGGCTCAACATTCACGACAATATGTTGATGGTACTCAAGTTCCTCTTCCACCTTCTTCCGGTATCCATGCTGGCGCGTTGGTTCTCTTTTCCGTTCTCGGAATTCCTCTCGCGATTACTTACAGCATACCCTTTGCTATGGCATCTATATTCTCAGCAACCTCAGGAGCAGGCCAAGGGCTATCACTAGGAGTTCTCAATCTTGCAATTGTCATACCACAGATGATTGTCTCTGTTCTGAGTGGACCATGGGATGCTCTATTTGGAGGAGGTAACCTGCCAGCTTTTGTGGTAGGTGCCGTCGCGGCTCTAGCAAGTGGCATACTATCCATAACCTTACTGCCGTCTCCACCACCAGATATGACCAAGTTACCTACCGGAGGAGGCTTTCATTAA 1572 0.451 MEPLSSTKQNNNNNNNNNNNFTKPSSLHLETQQPLDEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYIQLLGISHTLAPFIWLCGPISGMLVQPIVGYNSDRCTSRFGRRRPFIAAGSVAVAIAVFLIGYAADIGHSFGDNLDKKVRPRAIGVFVFGFWILDVANNMLQGPCRALLGDLCAGNQRKTRNANAFFSFFMAVGNILGYAAGSYSKLYHMFPFTKTKACNTYCANLKSCFFISIALLTVLVTAALIYVKEKAITTEKTVTDEDDGGSSMKCFGELSGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGTVGEGTVYDKGVRAGALGLMLNSVVLGVTSLGVDVLARGVGGVKRLWGIVNFVLAICLAMTVLVTKLAQHSRQYVDGTQVPLPPSSGIHAGALVLFSVLGIPLAITYSIPFAMASIFSATSGAGQGLSLGVLNLAIVIPQMIVSVLSGPWDALFGGGNLPAFVVGAVAALASGILSITLLPSPPPDMTKLPTGGGFH 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05128 523 SUPERFAMILY MFS general substrate transporter 42 510 IPR036259 -
Trre1g05128 523 CDD MFS_SLC45_SUC 44 504 - -
Trre1g05128 523 FunFam Sucrose transport protein 38 506 - -
Trre1g05128 523 PANTHER SUGAR TRANSPORTER 41 505 - -
Trre1g05128 523 MobiDBLite consensus disorder prediction 1 33 - -
Trre1g05128 523 Gene3D MFS general substrate transporter like domains 42 265 IPR036259 -
Trre1g05128 523 Pfam MFS/sugar transport protein 52 307 - -
Trre1g05128 523 NCBIfam sucrose/proton symporter 40 511 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05128 Trre-Chr1 57466897 57470488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05128 29 523 Sucrose Transporter Gene Family AT1G22710 68.127 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05128 K15378 - gmx:547679 819.69