Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05101 ATGGACTGTCTCAACTTCGCATCTTCCACACCTTCTCACCGCTCTGGGATGCTGCTGGGAAAACAGTTGAATTCCCCTCTTCTCACTATTGATTCTGCGGCACGGTTCTTCTCTTGCAAGGCTGATTTTGCTACTGCATCTTCAAGTATTCAATCGTCAAATATCAGATATTCTTGTGGATTTTCACCAAGTGTTGCAAAAGAAAAATGGACCTCAAATCATTCTACGAACCATTGGATATTGCATTCAACAGCACAGATAGAAAATATAATCACAAGTAATGAAGATCGGAGTATGTGGGAAGCATGTAGACAAGCTCTTTCTGTATTTAACTTCAGTGATGAAGAAAAGGATAAGATACTTGGAAAAGCCTTTGGCCTTGTTCATTCTCCTTATTGGGGAGAAGATCGTAAGAAAGAAGTTCCCAAATTCGAGACAGTAAACGAAATATTAGAATATTTAAGGAGTTTAAATCTTTCTGACGATGATCTTTCCAAGTTGCTCAAAAAATTTCCAGAAGTTCTTGGATGTAATTTAGAGGAAGAGTTGAAAGTGAATATAAAGATCTTGGAGCAGCAGTGGAGTATTGAAGGAAAATCACTTAGAAACCTTCTCCTTCGAAATCCGAAAGTTTTGGGTTATAATGTTGATTGCAAAGGAGATTGTATGGCACAATGCACTAGATGCTGGGTTCGATTCTAG 702 0.3832 MDCLNFASSTPSHRSGMLLGKQLNSPLLTIDSAARFFSCKADFATASSSIQSSNIRYSCGFSPSVAKEKWTSNHSTNHWILHSTAQIENIITSNEDRSMWEACRQALSVFNFSDEEKDKILGKAFGLVHSPYWGEDRKKEVPKFETVNEILEYLRSLNLSDDDLSKLLKKFPEVLGCNLEEELKVNIKILEQQWSIEGKSLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05101 233 FunFam uncharacterized protein LOC106769908 83 229 - -
Trre1g05101 233 Pfam mTERF 151 215 IPR003690 GO:0003690|GO:0006355
Trre1g05101 233 Gene3D Transcription termination factor 3, mitochondrial 78 229 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05101 Trre-Chr1 57206991 57209524 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre1g05101 mTERF 5.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05101 - - mtr:25484965 381.719