Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05017 ATGCGGTCAATTCCACTTGGAACCTCAGTATCTCCAAAACCTATAAACACTTCAAAAATTTCATCTTTTAATATTAATTTTAAGAAATCAAATACTTCCCCATCTTGGGTTTCACCTTCATCTCATGAAGTCTCTATTTTCTCTCTATCTCAATCAGGAATATGCAGAGCCAGTCAAGTTGTTGATTTGTTTCCGACCGTGTCTCCCGACATTACTGTGAGAGAGGCGCGATTAGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTTCCTGAATATTCCTTTCCGTTAGATTTTGTGTTGAGGATGGATAGATTGGTGGCTATGTTAGCAGGATTCTCTTTACCGAATGGTTGCAAAAGAACCTGTTTGGTTGCTGTTATTGGAAATTCACTTGATCAAACATTTTTATTTGGAAGTGAAGATTTTAAAATTGCGGGTTTTGATGGAAAAGTAAGCCTCAACAAGGGTTATGTGGCTGGCATATTAACAGTGGATACTGTTGCAGATTTTCTACCTAAAAAGGGGCCGCTTCGACAGAGAAGGACTGGAATTGCATACATATCAAATGTTGCAGTAAGAGAAAAATTTAGAAAGAAAGGAATAGCGAAACAATTGGTGGCTAAGGCAGAATCACAAGCAAGAAATTGGGGATGTCGCTCCATTGCATTACACTGTGATTTACGAAATCCTGCTGCGACGAAGTTATATGAAGGCCAAGGTTTCAAATCTATAAAGGTTCCGGATGGAGCTAACTGGCCTCAACCTAAAACTTCACCAGATGTTAAGTTCAACTTCATGATGAAGCTTCTCAACAGATCAGCAGTTTCTAAAACTAACTAA 852 0.3944 MRSIPLGTSVSPKPINTSKISSFNINFKKSNTSPSWVSPSSHEVSIFSLSQSGICRASQVVDLFPTVSPDITVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMLAGFSLPNGCKRTCLVAVIGNSLDQTFLFGSEDFKIAGFDGKVSLNKGYVAGILTVDTVADFLPKKGPLRQRRTGIAYISNVAVREKFRKKGIAKQLVAKAESQARNWGCRSIALHCDLRNPAATKLYEGQGFKSIKVPDGANWPQPKTSPDVKFNFMMKLLNRSAVSKTN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05017 283 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 71 272 - -
Trre1g05017 283 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 69 252 IPR016181 -
Trre1g05017 283 Pfam Acetyltransferase (GNAT) family 161 245 IPR000182 GO:0016747
Trre1g05017 283 CDD NAT_SF 187 228 - -
Trre1g05017 283 Gene3D - 68 249 - -
Trre1g05017 283 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 71 276 IPR000182 GO:0016747
Trre1g05017 283 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05017 Trre-Chr1 56374282 56376197 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre1g05017 Acetyltransf_1 5e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05017 - - gmx:100305894 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05017 1 56374282 56376197 Trre1g05017 1 56374282 56376197 ECH