Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04981 ATGGTTTTAGTTTCAAGTGTTTTTGGAAAGGCATATGGCTGTTCTACAGTGATTGGTCCAATGGATGCTAAATTAAAGCCGAGGAGGGTTTACCGAAAAAGGAGTGTGAAGCCCACTAAATTGGCACGGCCAGAAGAGCTTGTTGAAGTCAAACATGGGCGGGCTGAAATAAAAGTGGACAGGGCTGGATGTCACCTAATTTCGCCTAGGAATGCTCCTGCTGCAAAATCAGTTGCTTCTAAGGATGTTGCTTTGAGCCACTTTGTATTCCGGCTTGACTATAATACAAGAAGAGTTGGAAAAAAGATCTGGTCGAAAATATAG 324 0.429 MVLVSSVFGKAYGCSTVIGPMDAKLKPRRVYRKRSVKPTKLARPEELVEVKHGRAEIKVDRAGCHLISPRNAPAAKSVASKDVALSHFVFRLDYNTRRVGKKIWSKI 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04981 107 PANTHER UNCHARACTERIZED 50 95 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04981 Trre-Chr1 55983968 55986401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04981 13 94 Non-SMC Element family AT3G20760 31.111 3.47e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04981 K22825 - gmx:100781485 95.5153