Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04877 ATGGTGAAACATCTTGTTGTGCTTCCCCCATTACTTCTTCTTGTTCTTCTTTTCATTTCAATAACAGAAGTGGCTGAAGGTACTAAGAAATCATATGGGGTATACAAGAACAACAACAATTCTATAAAATTGTTTGTATTTGGAGATTCCTATGTTGACACAGGAAATTTCTTGAACTCACCATCATATAAGCTTCCTTATGGAATCACTTTTCCTGGTAAACCTGCTGGTAGATTCAGTGATGGTCGTGTTCTTACCGATTACATTGCTTCCTATTTGAAAATTGAAACCCCTACACCATACGCATTGAGAAATTCTTCTACTCTACAGTATGGAATCAACTTTGCTCAAGGAGGGACTGGTATTTTCCAAACTTTGACTAATGGACCAAACATGACTGTTCAAATTGACTCACTTGAGAAGTTAATCCAACAAAATGTTTATACCAAACAAGACCTTGAATCCTCTGTTGCACTTATTGGTGCTTCTGGCAACGATTACACTGCTTTTATAGTAAACAATAGAAGCATTATGGAGATAAAATCCTTCACTACAAGCCTTATCAACCAACTATCCATAAATATTCAAAGAATCCACAATTTGGGAATAAACAAAATAGCAATTGGTTTATTGGAGCCAGTTGGGTGTTTGCCTCAGATAACAGTGGTAACTTTTCATCTTGCTTGTGTTGACATTTTAAATTTGGTCTCTGAAAATCATAACAAAGAATTACTCCAAACTGTGCAACAACTTAACCAGCAAGCTGGAAAATCAGTTTATGTCACACTAGACATCTACAATGCTTTCCTCTCAACAATTGCAACCATGAAAAAAAACCATGAAGAAAATTCAACACTGATGAATCCATTGAAATTGTGTTGTGAGGGAGAGGGTTTGAATAACAAATGTGGAAGTGTGGATGATAATGGGGAAAAGAAATATAGTTTATGTGACAAACCAGAGCTTTCATTCTTTTGGGACTATGTTCATCCTTCTCAAAATGGTTGGAATAGTGTCTACACATTGTTGCAACCTTCTCTTGGTCAGCTTATTGATAATAATTAA 1065 0.3559 MVKHLVVLPPLLLLVLLFISITEVAEGTKKSYGVYKNNNNSIKLFVFGDSYVDTGNFLNSPSYKLPYGITFPGKPAGRFSDGRVLTDYIASYLKIETPTPYALRNSSTLQYGINFAQGGTGIFQTLTNGPNMTVQIDSLEKLIQQNVYTKQDLESSVALIGASGNDYTAFIVNNRSIMEIKSFTTSLINQLSINIQRIHNLGINKIAIGLLEPVGCLPQITVVTFHLACVDILNLVSENHNKELLQTVQQLNQQAGKSVYVTLDIYNAFLSTIATMKKNHEENSTLMNPLKLCCEGEGLNNKCGSVDDNGEKKYSLCDKPELSFFWDYVHPSQNGWNSVYTLLQPSLGQLIDNN 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04877 354 PANTHER OSJNBB0059K02.9 PROTEIN 18 351 - -
Trre1g04877 354 Pfam GDSL-like Lipase/Acylhydrolase 44 335 IPR001087 GO:0016788
Trre1g04877 354 Gene3D SGNH hydrolase 32 346 IPR036514 -
Trre1g04877 354 SUPERFAMILY SGNH hydrolase 43 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04877 Trre-Chr1 54896192 54901238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04877 13 339 Pollen Coat Proteome AT1G75930 26.912 1.37e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04877 - - gmx:100790363 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04877 1 54896192 54901238 Trre1g04877 1 54896192 54901238 ECH