Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04845 ATGACTTCTCTCTTTTCATCTTCTGCCTCTCTTTCTTCTTACTACCATCTCATCTTCACTGTCTTAGCTTTTCTCTTATCAGCACTTATTTTTTTCCTCACACAAAAAACCAAATCCAAAAGCCATAACCTTCCACCAGGTCCACCAGGATGGCCAATTGTTGGCAACCTTTTCCAAGTTGCGCGTTCCGGTAAACCATTCTTTGAGTATGTGAAAGAAATGAAAGCACAATATGGCTCAATTTTCACACTCAAGATGGGAACAAGGACAATGATTGTTCTAACTGATGCGAAACTTGTTCACGAAGCTTTCATTCAAAAGGGTGCTCTCTATGCAACTAGACCACCTGAAAATCCAACAAGGAACATATTCAGTGCCAACAAGTTCACTGTGAATGCAGCAGTTTATGGTCCTGTTTGGAAATCACTGAGAAGAAACATGGTGCAGAACATGCTGAACTCAACTAGACTTAAAGAGTTTAAAAGTCTCAGAGAAGATGCAATGGATAAACTCATCAATAGGCTTAAAGTTAATGCAGAGAAGAATAATGGTGTTGTTGTGGTTGTTAAAGATGCAAGGTTTGCGGTTTTTTGCATACTGGTTGTTATGTGTTTTGGTTTAGAAATGGATGAAGAAAAACTTGAGAGAATAGATCAAGTTATGAAGAATGTTCTGATTATATTAGATCCAAGAATTGATGATTTTCTACCAATCCTAAGCATGTTTTTCTCTAAACAAAGAAAACGAGTTGTAGAAGTTCGCAAAGAACAAGTCGAATTCATAGTTCCTTTCATTGAACAAAGAAGGAGAGCAATTCAAAATCCAGGATCAGATCAAACAGCTACAACTTTTTCATATTTAGACACACTATTTGATGTCAAAATCCATGAAGGTAAAAAATCATCACCTTCTAATGAAGAATTGGTTTCACTTATCTCAGAGTTTCTCAATGGAGGAACAGATACAACAGCAACTGCTATTGAATGGGGAATAGCACAACTCATTGAAAATCCTGAGGTTCAAACAAAACTTTATCAAGAAATTAATATGACAGTTGGAAATAAAAAAGTGGATGAAAAAGATATTGAGAAAATGCCTTATTTACAAGCTGTGGTGAAAGAGTTATTAAGGAAGCATCCTCCAACACATTTTGTACTAACACATGCTGTGACTGAACCTACTACATTAGGAGGATATGATATACCAATTGATGCAAATGTTGAGGTTTATACAGCTGGCATAGGTGAGGACCCTAAACTGTGGTCCAACCCTGAAAAGTTTGATCCTGAAAGGTTCTTTTCTAGAGGTGAGGATGCTGATATAACTGGTGTAACAGGAGTTAAAATGATGCCTTTTGGTATTGGTAGAAGGATATGTCCTGGTTTGGCTATTGGTACTGTCCATATTAGTTTGATGTTGGCTAGAATGATTCAGGAGTTTGAATGGACTGCTTATCCACCAGGGAAGAAGATAGATTTCAGTGGAAAGATGGAATTTACTGTTGTCATGAAGGAGTCTTTAAGAGCAGTTATCAAGCCAAGAGAATAA 1548 0.3695 MTSLFSSSASLSSYYHLIFTVLAFLLSALIFFLTQKTKSKSHNLPPGPPGWPIVGNLFQVARSGKPFFEYVKEMKAQYGSIFTLKMGTRTMIVLTDAKLVHEAFIQKGALYATRPPENPTRNIFSANKFTVNAAVYGPVWKSLRRNMVQNMLNSTRLKEFKSLREDAMDKLINRLKVNAEKNNGVVVVVKDARFAVFCILVVMCFGLEMDEEKLERIDQVMKNVLIILDPRIDDFLPILSMFFSKQRKRVVEVRKEQVEFIVPFIEQRRRAIQNPGSDQTATTFSYLDTLFDVKIHEGKKSSPSNEELVSLISEFLNGGTDTTATAIEWGIAQLIENPEVQTKLYQEINMTVGNKKVDEKDIEKMPYLQAVVKELLRKHPPTHFVLTHAVTEPTTLGGYDIPIDANVEVYTAGIGEDPKLWSNPEKFDPERFFSRGEDADITGVTGVKMMPFGIGRRICPGLAIGTVHISLMLARMIQEFEWTAYPPGKKIDFSGKMEFTVVMKESLRAVIKPRE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04845 515 FunFam Cytochrome P450 family protein 38 515 - -
Trre1g04845 515 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Trre1g04845 515 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 Pfam Cytochrome P450 45 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 SUPERFAMILY Cytochrome P450 45 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 CDD CYP77_89 77 508 - -
Trre1g04845 515 Gene3D Cytochrome P450 36 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04845 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 21 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04845 Trre-Chr1 54663195 54664742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04845 35 514 Cytochrome P450 AT3G10570 68.125 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04845 K21995 - gmx:100795510 842.417