Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04745 ATGCTGCCAATGAGAAAGAAAATGCCTCAGTACCAAATGATCACATGTGATGAAATCGTTTCAGCTACGTCATCTGTCTCTGAAGATCTGACAATTGGAATTGGTGCATATGGAATGGTGTATAAGTGCACTTTGCATCACACAACTGTTGCTGTTAGAATTCTCCACTCTAATGGATACCGTAAAAGCAAGCAATTCCAGCAAGAGTTAGTGATACTAAGCAGAATTCGTCATCCAAACTTGCTTCTCCGTCTAGGTGCATGTCCTGATCACGGATGCCTTGTGTGTGAATACACGGAGAACACTCTTTCCTTTCTTCACACCTCAAAGCCACAACCTATCATCGATTGCAATTCGAAACTTGCAAACATCTTACTTGGTGGTAACCTTATCAGCAAGATTGGTGATGTCGGTGTTTCTACAATCCTCAATTCAGATGATTTATTTACTATGTATAAGGACACGGTGCCTGTTGGAACACTCAGCCACATTGACCACGAGTATCAGAGGAATGGTGTAATTTCTACGAAATTTGATGTCTATGCTTTTGGATCAGTGATCTTACGGTTACTGACGGCAAAACGGGCTTGTAAGGTGAGGATTTTCCCCAATTATAAACTTATGTTCATACCTTATCTCTATTCCATGTGA 651 0.4086 MLPMRKKMPQYQMITCDEIVSATSSVSEDLTIGIGAYGMVYKCTLHHTTVAVRILHSNGYRKSKQFQQELVILSRIRHPNLLLRLGACPDHGCLVCEYTENTLSFLHTSKPQPIIDCNSKLANILLGGNLISKIGDVGVSTILNSDDLFTMYKDTVPVGTLSHIDHEYQRNGVISTKFDVYAFGSVILRLLTAKRACKVRIFPNYKLMFIPYLYSM 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04745 216 SUPERFAMILY Protein kinase-like (PK-like) 8 197 IPR011009 -
Trre1g04745 216 Pfam Protein tyrosine and serine/threonine kinase 31 109 IPR001245 GO:0004672|GO:0006468
Trre1g04745 216 PANTHER OS02G0152300 PROTEIN 102 196 - -
Trre1g04745 216 Gene3D Transferase(Phosphotransferase) domain 1 4 99 - -
Trre1g04745 216 ProSiteProfiles Protein kinase domain profile. 26 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g04745 216 Gene3D Transferase(Phosphotransferase) domain 1 100 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04745 Trre-Chr1 53373868 53374798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04745 10 196 U-box Gene Family AT5G51270 55.204 6.38e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre1g04745 PK_Tyr_Ser-Thr 6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04745 - - pcin:129313959 252.677