Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04744 ATGTGTTCCCTCTCACAAGTGCATAATGATGTGGCAACTGCTTTGAAAAGGGATAGTGGAGTGGCAACCAAATCAAATCTTCTACCTTTTAAGAGTTTGTGTGAGAAAAGAAAGCTGCATGTAGATGTTGTAGTGATTGAATCAGATGATGTAGCAACTGCAATAGTGGAGGAAGTAGCTAAGGATGCTATAACCAAACTTGTCCTTGGAGCTTCATCTTCTGATGGATTTAAAAGTAAACATAAGGGTATGTCTGCAAAAGTCTCGGTGTTCACTCCAAGATTTTGTACAGTTTATGCTGTTTTCAAAAGTAAATTGTCCATACAGCAAGAAAAGCTGCATATTTGA 348 0.3793 MCSLSQVHNDVATALKRDSGVATKSNLLPFKSLCEKRKLHVDVVVIESDDVATAIVEEVAKDAITKLVLGASSSDGFKSKHKGMSAKVSVFTPRFCTVYAVFKSKLSIQQEKLHI 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04744 115 PANTHER OS02G0152300 PROTEIN 21 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04744 Trre-Chr1 53373464 53373811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04744 4 107 U-box Gene Family AT4G25160 43.269 3.25e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04744 - - gmx:100818628 146.747