Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04706 ATGAGTTCCAATTCTAACAAGTTGAACCAGAGAAGTATGCTTCTCGCAAACAAACCAATGAGTGAGACTAATGTCTTGAAGATTAATGGAAACACAATTTCTATGAAAAACTATTCACTTTCATCAGAAGAACAGAACAAGCTTCTTTGTGAGATACAAAGTGCTCTAAATGATCAAAACCATGTTATTGATGATGACAAGTTACGGTTAGTTATAAACACAATTATGAAACACTCTTTTGAATTATTACAGATGAAAACACGTTCTACAAATGTAGATGTCTTCAATGTTGGTTCTGCTACAACATGTGAGCGCAATCTATGGTGGATCGGAGGCTTTCGTCCTTCTCAACTTCTTCAGATTATTCTGCCTCAAGTTCAGCATATGTGCAGCCAGCAACAACTTAGTGTTATTTATGATCTTGGACAATCATGTCAAGTAGTAGAATATGCTCTTGCACAAGGCATGGTTAAACTTCAGCAAAATATTGATAAAGCAACACCAACAGATGACAAAGAGTTTCAACTGACGTATGTACATCAACAACTATGCTTCTTCAAGCAGGCTGATAATCTTCGCCAGGAATTCTTGCATCAATTTTCTCATCTCCTTACAATTTCTCAGCAAGCTGAATTCATAGTTGCTCTCAAGGAACATCTGCATAATCCGCAGCCTCGAAGGAGCTCACTTTGA 693 0.3723 MSSNSNKLNQRSMLLANKPMSETNVLKINGNTISMKNYSLSSEEQNKLLCEIQSALNDQNHVIDDDKLRLVINTIMKHSFELLQMKTRSTNVDVFNVGSATTCERNLWWIGGFRPSQLLQIILPQVQHMCSQQQLSVIYDLGQSCQVVEYALAQGMVKLQQNIDKATPTDDKEFQLTYVHQQLCFFKQADNLRQEFLHQFSHLLTISQQAEFIVALKEHLHNPQPRRSSL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04706 230 ProSiteProfiles DOG1 domain profile. 31 230 IPR025422 GO:0006351|GO:0043565
Trre1g04706 230 PANTHER TRANSCRIPTION FACTOR TGA9 36 222 - -
Trre1g04706 230 Pfam Seed dormancy control 49 123 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04706 Trre-Chr1 53067143 53069117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04706 22 220 Calmodulin-binding Proteins AT5G10030 37.788 2.29e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04706 K14431 - mtr:11422351 324.709