Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04673 ATGGCAGAGATTAAACTACATGGATTTTGGTATAGTCCTTTTACTTTAAGGATAGTATGGACCCTAAAACTGAAGGGTATACCATATGAGAACATAGAGGAAGATCGTTTCAATAAGAGTCCTCAACTTCTTCAATATAACCCAATTCACAAAAAGACTCCAGTGCTAGTTCATGATGGAAAACCTATATGTGAGTCCATGATCATTGTTGAATACATTGATGAGATATGGCCACAGAATTCATTGCTTCCTGCTGATCCCTATGACAGAGCTCAAGCTCGATTTTGGGTTAAATATGTCGATGAAATGTTTTTAGCAATTACGGCACACTTTCGTACCAGTGGTGGTGAGGAGCGGGAGAAGGCCAGAGAGAATATATGGGAGCGACTTAAAGTTGTTGAGGATCAGTGTTTGGATGATCAGAAGAAATTCTATGGGGGAGAAACCATTAATATTGTAGACATAGCTCTTGGATCATTTGTCAATTTTATTAAGGTTCAGGATAGGTTTGAAGTGAAGGTCTTGCAATCTGAGAGATTCCCCCGCTTGCATTTATGGTTTAATAATTTCAAGGATGTTCCGATCATCAAAGAAAACACACCTAACCAAGAGAAGTTGGTGTCTTTTCTTATTCCTCTTATTGAAAAAATCAAGGCATCTTCTTGA 666 0.3814 MAEIKLHGFWYSPFTLRIVWTLKLKGIPYENIEEDRFNKSPQLLQYNPIHKKTPVLVHDGKPICESMIIVEYIDEIWPQNSLLPADPYDRAQARFWVKYVDEMFLAITAHFRTSGGEEREKARENIWERLKVVEDQCLDDQKKFYGGETINIVDIALGSFVNFIKVQDRFEVKVLQSERFPRLHLWFNNFKDVPIIKENTPNQEKLVSFLIPLIEKIKASS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04673 221 Gene3D - 83 220 - -
Trre1g04673 221 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Trre1g04673 221 Gene3D Glutaredoxin 1 82 - -
Trre1g04673 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 207 IPR045073 -
Trre1g04673 221 CDD GST_N_Tau 4 77 - -
Trre1g04673 221 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Trre1g04673 221 CDD GST_C_Tau 87 210 IPR045074 GO:0004364|GO:0006749
Trre1g04673 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 209 IPR010987 -
Trre1g04673 221 SFLD Main (cytGST) 1 219 - -
Trre1g04673 221 Pfam Glutathione S-transferase, C-terminal domain 118 187 - -
Trre1g04673 221 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Trre1g04673 221 FunFam Glutathione S-transferase GSTU6 1 84 - -
Trre1g04673 221 SUPERFAMILY GST C-terminal domain-like 75 216 IPR036282 -
Trre1g04673 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04673 Trre-Chr1 52777670 52778548 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04673 4 220 Glutathione S-transferase Gene Family AT3G09270 45.455 5.43e-59 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04673 K00799 - gmx:547584 312.768