Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04672 ATGGCAGATATTAAACTACATGGATTTTGGTATAGTCCTTTTACTTTAAGGGTAGTATGGTCCCTAAATCTGAAGGGTATACCATATGAGAACATAGAGGAAGATCGTTTCAATAAGAGTCCTCAACTTCTTCAATATAACCCAATTCACAAAAAGACTCCAGTGCTAGTTCATGATGGAAAACCCATATGTGAGTCCATGATCATTGTTGAATACATTGATGAGATATGGCCACATAACTCATTGCTTCCTGCTGATCCCTATGACAGAGCTCAAGCCCGATTTTGGGTCAAATATATCGATGATATGATTTCAGCATTGTCGGCACACCTACGAAGCAGAAGTGGTGAAGAGCGAGAGAAGGCCAAAGAGAATATATTGGAGCGACTCAGAGTTGTTGAGGATCAGTGTTTGGATGATCAGAAGAAATTCTATGGGGGGAACACCATTAACATCGTAGACATAGCTCTTGGATCTTTTGTCAAAGTTATTGAGATTCAAGAAGATATGTTTGAAGTGAAGATCTTGCAAAGTGAGAGATTCCCCCGCTTGCATTTATGGTTTAATAATTTCAAGGATGTTCCAGTCATCAAAGAAAACATCCCTGGTCAAGAGAAATTGGTTGCTTTTTATAAGCCTCTGATTGAAAAAATATTGGCATCGTCTTGA 669 0.3871 MADIKLHGFWYSPFTLRVVWSLNLKGIPYENIEEDRFNKSPQLLQYNPIHKKTPVLVHDGKPICESMIIVEYIDEIWPHNSLLPADPYDRAQARFWVKYIDDMISALSAHLRSRSGEEREKAKENILERLRVVEDQCLDDQKKFYGGNTINIVDIALGSFVKVIEIQEDMFEVKILQSERFPRLHLWFNNFKDVPVIKENIPGQEKLVAFYKPLIEKILASS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04672 222 FunFam Tau class glutathione S-transferase 83 221 - -
Trre1g04672 222 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Trre1g04672 222 CDD GST_N_Tau 4 77 - -
Trre1g04672 222 SFLD Main (cytGST) 1 220 - -
Trre1g04672 222 Gene3D - 86 222 - -
Trre1g04672 222 Gene3D Glutaredoxin 1 85 - -
Trre1g04672 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 207 IPR045073 -
Trre1g04672 222 FunFam Glutathione S-transferase GSTU6 1 84 - -
Trre1g04672 222 SUPERFAMILY Thioredoxin-like 3 103 IPR036249 -
Trre1g04672 222 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Trre1g04672 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Trre1g04672 222 Pfam Glutathione S-transferase, C-terminal domain 113 191 IPR004046 -
Trre1g04672 222 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Trre1g04672 222 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Trre1g04672 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04672 Trre-Chr1 52755099 52755983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04672 4 221 Glutathione S-transferase Gene Family AT3G09270 45.495 2.81e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04672 K00799 - gmx:547584 322.013