Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04635 ATGGCTGGTAGTAATCAAGTCAACCTTAATGAATCTAAGAGTGTTGTTCCTCTCAATACTTGGGTGCTTATCTCCAATTTCAAGCTTGCTTACAATCTACTAAGGCGTGCCGATGGAACATTCAATAGAGAGTTAGCTGAGTTCCTTGACCGCAAGGTCCCGGCCAATACTATTCCAGTTGATGGAGTTTTCTCTTTCGATCACGTGGATCGAACTACAGGACTCTTTAGTAGGGTTTATCAACCTGCTCCCGAGAATGTTACTACTTGCGGCATTATAGAGCTGGAAAAGCCCTTAAGCACCACAGAGATTGTACCTGTCATAATCTTTTTCCACGGTGGAAGCTTCTCTCATTCCTCTGCTAATAGTGCTATTTATGACACTTTCTGCCGTCGCCTCGTGAGCATGTGTAAGGCTGTTGTTGTTTCTGTAAACTACCGGCGATCACCCGAGCATAGGTATCCGTGTGCTTACGAAGACGGTTGGAATGCTCTCAATTGGGTTAAGTCAAGGACATGGCTTCAAAGTGGAAAGGATTCTAAGGTTTATGTTTACATGGCTGGTGATAGTTCCGGTGGTAACATTGCTCATCATGTCGCAGTGAGGGCTGCTGAGGAAAATGTCGAGGTACTAGGTAATATTCTTCTCCATCCACTTTTCGGTGGGGAGAAGCGTACGGAATCAGAGAAGAAACTGGATGGAAAGTATTTCGTGAAGTTGCAAGATCGCGATTGGTATTGGAGAGCTTTTCTACCTGAAGGAGAAGATAGAGATCACCATGCTTGTAATCCATTTGGACCTAAAGGTAAAAGCCTTAAAGGACTTAAGTTCCCTAAAAGCCTTGTTTGTGTGGCTGGTTTGGATCTTCTACAAGACTGGCAATTGGAATATGCAGAAGGTCTCAAGAATTATGACCATGATGTCAAACTTCTTTACCTAAAGGAAGCTACTATAGGTTTCTACTTCTTGCCTAATAATGATCACTTCTATTGCCTCATGAATGAGATAAACGCCTTCGTTCATCCTCCTAACTGTTGA 1038 0.4316 MAGSNQVNLNESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRTTGLFSRVYQPAPENVTTCGIIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSMCKAVVVSVNYRRSPEHRYPCAYEDGWNALNWVKSRTWLQSGKDSKVYVYMAGDSSGGNIAHHVAVRAAEENVEVLGNILLHPLFGGEKRTESEKKLDGKYFVKLQDRDWYWRAFLPEGEDRDHHACNPFGPKGKSLKGLKFPKSLVCVAGLDLLQDWQLEYAEGLKNYDHDVKLLYLKEATIGFYFLPNNDHFYCLMNEINAFVHPPNC 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04635 345 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Trre1g04635 345 SUPERFAMILY alpha/beta-Hydrolases 62 339 IPR029058 -
Trre1g04635 345 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Trre1g04635 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Trre1g04635 345 PANTHER ARYLACETAMIDE DEACETYLASE 43 315 - -
Trre1g04635 345 FunFam Gibberellin receptor GID1 1 342 - -
Trre1g04635 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04635 Trre-Chr1 52429665 52431387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04635 1 341 Carbohydrate Esterase AT3G63010 78.655 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04635 K14493 - gmx:100804463 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04635 1 52429665 52431387 Trre1g04635 1 52429665 52431387 ECH
Trre13g03711 13 44925166 44926627 Trre1g04635 1 52429665 52431387 ECH
Trre13g03711 13 44925166 44926627 Trre1g04635 1 52429665 52431387 PCT