Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04596 ATGGCACTCAAGATTTATGGTCTAGCCATGTCCACAAACACAACTCGTGCCATGATTTGTTTACATGAAAAAGAAGTTGATTTTGAGCTTGTTCCAGTCAATGTGTTTGCTTCTGAGCATAAACAGCCTCCTTTTCTCAACAAAAATCCCTTTGGTTTGATTCCTGTACTTGAAGATGATGATCTCACCCTCTTTGAGTCAAGAGCCATAACCTCATATGTAGCTGAAAAATTCAAGGAAATTGGACCTGATTTGATTAGGCACAAAGACACAAAAGAAGCTTCATTAGTCAAAATGTGGACAGAGGTAGAGTCTCACTACTATGACCCTGCAGTCTCACCAATAATCTATGAATACTTTGTGGCTCCATTTCAAGGCCAAGAACCAAACAAGACAGTGATTGAAACAAACATGGAGAAATTGAAGATTGTGCTTGATGTGTATGAGGCAAAACTAAGCACAACAAAGTACCTTGCTGGAGATTTTTATAGTCTTGCTGATCTTAGTCATATATCTGAAACTCATTATTTTATGCAAACTCCTTGTTCTTCAATGATCAATGAAAGGATTCATGTTAAGGCTTGGTGGGAAGATATATCTTCTAGGCCTGCTTTTCAAAAAGTTGTGAGTGGTATGACTTTTGGTCAGAATGATTAG 657 0.3775 MALKIYGLAMSTNTTRAMICLHEKEVDFELVPVNVFASEHKQPPFLNKNPFGLIPVLEDDDLTLFESRAITSYVAEKFKEIGPDLIRHKDTKEASLVKMWTEVESHYYDPAVSPIIYEYFVAPFQGQEPNKTVIETNMEKLKIVLDVYEAKLSTTKYLAGDFYSLADLSHISETHYFMQTPCSSMINERIHVKAWWEDISSRPAFQKVVSGMTFGQND 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04596 218 Gene3D - 87 209 - -
Trre1g04596 218 SUPERFAMILY GST C-terminal domain-like 73 212 IPR036282 -
Trre1g04596 218 Gene3D Glutaredoxin 1 85 - -
Trre1g04596 218 SFLD Main (cytGST) 1 212 - -
Trre1g04596 218 FunFam Glutathione S-transferase F2 2 86 - -
Trre1g04596 218 CDD GST_C_Phi 92 209 IPR034347 -
Trre1g04596 218 CDD GST_N_Phi 2 77 - -
Trre1g04596 218 SFLD Main.5: Phi-like 1 212 - -
Trre1g04596 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Trre1g04596 218 SUPERFAMILY Thioredoxin-like 2 80 IPR036249 -
Trre1g04596 218 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Trre1g04596 218 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 210 - -
Trre1g04596 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 218 IPR010987 -
Trre1g04596 218 FunFam Glutathione S-transferase F2 88 209 - -
Trre1g04596 218 Pfam Glutathione S-transferase, C-terminal domain 116 203 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04596 Trre-Chr1 52008903 52010206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04596 1 215 Glutathione S-transferase Gene Family AT3G62760 57.209 1.67e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04596 K00799 - gmx:547588 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04596 1 52008903 52010206 Trre1g04596 1 52008903 52010206 ECH