Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04595 ATGGCAACAATAAAAGTGCATGGAAGCCCTTTCTCAATAGCCACCATGCGGGTTACTGCAACTCTGTATGAAAAACATCTTGAATTTGATTTTGTTAACATTAACGTGAGGAATGGTGATCACAAAAAGGAACCATTCATATTACTCAATCCATTTGGTCAAGTTCCAGCATTTGAAGATGGAGACTTAAAACTCTTTGAATCGAGGGCGATAACACAATACATCGATCACGAGTATGCTGATAAGGGTACTAAGTTAACAATTAGTGACTCCAAGAAGAAGGCAATAATGGGGTTGTGGTCAGAAGTCGAAAGCCAACACTTCGATCAAGTAGCAAGAAAACTTGATTGGGAATTAGGGATAAAGCCTTTATTTGAAATACCTTTGGATACAAAAATTGTGGAAGAGATTGAAGCTAAGATGGATAGTATTCTTGATGTGTATGAGAGAAGATTGTCTGAATCCAAATACTTGGGAGGTGAGAGTTTCACCTTGGTGGATCTGCATCACTTACCTTCTCTTTATTACTTGATGAAATCACAGATGATCAAGAAGTTGTTTGAATCAAGACCCTATGTTAGTGCTTGGGTGGCTGATATAACTGCAAGACCAGCTTGGTCTAAAGTCATTGCCATGATACCTAATTAA 648 0.3812 MATIKVHGSPFSIATMRVTATLYEKHLEFDFVNINVRNGDHKKEPFILLNPFGQVPAFEDGDLKLFESRAITQYIDHEYADKGTKLTISDSKKKAIMGLWSEVESQHFDQVARKLDWELGIKPLFEIPLDTKIVEEIEAKMDSILDVYERRLSESKYLGGESFTLVDLHHLPSLYYLMKSQMIKKLFESRPYVSAWVADITARPAWSKVIAMIPN 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04595 215 Gene3D Glutaredoxin 1 87 - -
Trre1g04595 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Trre1g04595 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 215 IPR010987 -
Trre1g04595 215 SFLD Main (cytGST) 1 212 - -
Trre1g04595 215 Pfam Glutathione S-transferase, C-terminal domain 131 204 IPR004046 -
Trre1g04595 215 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Trre1g04595 215 Gene3D - 89 215 - -
Trre1g04595 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 211 - -
Trre1g04595 215 SFLD Main.5: Phi-like 1 212 - -
Trre1g04595 215 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Trre1g04595 215 FunFam Glutathione S-transferase F2 89 210 - -
Trre1g04595 215 SUPERFAMILY GST C-terminal domain-like 82 210 IPR036282 -
Trre1g04595 215 CDD GST_C_Phi 92 210 IPR034347 -
Trre1g04595 215 FunFam Glutathione S-transferase F2 3 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04595 Trre-Chr1 52006887 52007889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04595 1 210 Glutathione S-transferase Gene Family AT1G02930 57.619 4.62e-83 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04595 K00799 - gmx:100799868 305.064