Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04594 ATGGCAACAATAAAAGTGCACGGAAGCCCCTACTCAACGGCAACAATGCGGGTTACTGCAATTCTGTGTGAAAAACAGCTTGAATTTGAGTTAGTTTATGTTAATGTAAGGAATGGTGATCACAAAAAGGAACCTTTCATATCACAACACAATCCATTTGGTCTAGTTCCTGCATTTGAAGATGGAGATTTAAATCTCTTTGAATCAAGGGCAATAACACAATATATTAATCATGAGTATGGTGATAAGGGAACTAAGTTAATAACAAGCAGTGATGACTCCAAGAAAATGGCAATAATGTGGATGTGGTCAGAAGTGGAGAGCCTACACTTTGATCAAGCAGCATCAAAACTTGTTTGGGAACTAGGGATAAAACCTTTATTTGGTGCTCCATTGGATCCAAAAATTGTGGAAGAGAATGAAGCTAAGTTGGATAGTATTCTTAATATGTATGAGAAAAGATTGTCTGAATCCAAATACTTGGGAGGTGAAAATTTCACCTTGGTGGATCTGCATCACTTACCCTCACTTCATTATTTGATGAAGTCACATATCAAGAAGTTGTTTGAATCAAGACCTTATGTTAGTGCTTGGGTGGCTGATATAACTGCAAGACCAGCTTGGTCTAAAGTCATTGCCATGATACCTAATTAA 654 0.3731 MATIKVHGSPYSTATMRVTAILCEKQLEFELVYVNVRNGDHKKEPFISQHNPFGLVPAFEDGDLNLFESRAITQYINHEYGDKGTKLITSSDDSKKMAIMWMWSEVESLHFDQAASKLVWELGIKPLFGAPLDPKIVEENEAKLDSILNMYEKRLSESKYLGGENFTLVDLHHLPSLHYLMKSHIKKLFESRPYVSAWVADITARPAWSKVIAMIPN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04594 217 CDD GST_C_Phi 95 212 IPR034347 -
Trre1g04594 217 FunFam Glutathione S-transferase F2 3 88 - -
Trre1g04594 217 SUPERFAMILY GST C-terminal domain-like 75 215 IPR036282 -
Trre1g04594 217 SUPERFAMILY Thioredoxin-like 1 84 IPR036249 -
Trre1g04594 217 SFLD Main (cytGST) 1 214 - -
Trre1g04594 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 84 IPR004045 -
Trre1g04594 217 Pfam Glutathione S-transferase, C-terminal domain 117 206 IPR004046 -
Trre1g04594 217 Gene3D - 93 217 - -
Trre1g04594 217 FunFam Glutathione S-transferase F2 91 212 - -
Trre1g04594 217 Pfam Glutathione S-transferase, N-terminal domain 3 77 IPR004045 -
Trre1g04594 217 Gene3D Glutaredoxin 1 88 - -
Trre1g04594 217 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 213 - -
Trre1g04594 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 217 IPR010987 -
Trre1g04594 217 SFLD Main.5: Phi-like 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04594 Trre-Chr1 52003545 52004781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04594 1 212 Glutathione S-transferase Gene Family AT1G02930 58.019 3.99e-84 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04594 K00799 - gmx:100799868 308.531