Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04510 ATGTCCAACGATTCTCCTTCTCCTAATCTTTATGCCAAAGGTCTTCTTTGCAATGCTGCTGCTGGTGCCGCAGCTGGGGTTATTTCTGCCACGTTTGTATGTCCTTTAGATGTAATCAAAACTAGGTTACAGGTTCATGGGACTCCTGAGCTTGCTAATGGAAATGTTAAAGGTAGTCTTATAGTTGGTAGTTTGGGACAAATATATCAGAAGGAGGGGTTGCGTGGCATGTACCGTGGGCTAGCTCCAACTGTTCTCGCCTTACTTCCAAACTGGGCTGTCTATTTTACCATGTACGAGCAACTCAAGTGGATGCTTTCTGATGATGAAAACCACCGTCTTTCAGTTGGAGCTAATATGGTAGCTGCTTCAGGTGCCGGAGCTGCAACTACTATAGTTACAAATCCATTCTGGGTTGTCAAAACTAGACTCCAGACACAGGGAATAAGACCCGGTGTTGTGCCATATAGAAATACCCTATCTGCTTTGAAGAGAATAGCTCACAAGGAGGGCATTCGTGGGATGTACAGTGGCCTTGTACCTGCTCTGGCTGGTATCAGTCATGTTGCCATCCAGTTTCCAATATATGAGAAAATAAAATTTTATTTAGCAAATCAAGATAACACAACAGTGGATAAACTCGGCGCACGTGATGTTGCAATTGCCTCATCAGTCTCCAAAATGTTTGCATCCACATTGACATATCCTCATGAGGTTGTTCGTTCCAGACTGCAAGAACAAGGACACCACTCAGAGAAGCGGTACTCTGGTGTGACAGACTGCATTAGAAAGGTATCTCAAGAAGGGGGACTTTCTGGTTTTTACCGCGGTTGTGGTACCAACCTCCTGAGGACAACCCCAGCTGCCGTAATCACATTCACCAGTTTTGAGATGATACACCGTTTTCTAGTTTCTCCTTCCCCTTCTGACCCACAGCCGCATAATTTGTAA 951 0.449 MSNDSPSPNLYAKGLLCNAAAGAAAGVISATFVCPLDVIKTRLQVHGTPELANGNVKGSLIVGSLGQIYQKEGLRGMYRGLAPTVLALLPNWAVYFTMYEQLKWMLSDDENHRLSVGANMVAASGAGAATTIVTNPFWVVKTRLQTQGIRPGVVPYRNTLSALKRIAHKEGIRGMYSGLVPALAGISHVAIQFPIYEKIKFYLANQDNTTVDKLGARDVAIASSVSKMFASTLTYPHEVVRSRLQEQGHHSEKRYSGVTDCIRKVSQEGGLSGFYRGCGTNLLRTTPAAVITFTSFEMIHRFLVSPSPSDPQPHNL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04510 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 302 IPR018108 -
Trre1g04510 316 Pfam Mitochondrial carrier protein 220 304 IPR018108 -
Trre1g04510 316 Pfam Mitochondrial carrier protein 114 205 IPR018108 -
Trre1g04510 316 Pfam Mitochondrial carrier protein 15 108 IPR018108 -
Trre1g04510 316 PRINTS Mitochondrial carrier protein signature 18 31 IPR002067 GO:0055085
Trre1g04510 316 PRINTS Mitochondrial carrier protein signature 129 147 IPR002067 GO:0055085
Trre1g04510 316 PRINTS Mitochondrial carrier protein signature 223 245 IPR002067 GO:0055085
Trre1g04510 316 PRINTS Mitochondrial carrier protein signature 80 100 IPR002067 GO:0055085
Trre1g04510 316 PRINTS Mitochondrial carrier protein signature 31 45 IPR002067 GO:0055085
Trre1g04510 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 114 202 IPR018108 -
Trre1g04510 316 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 111 - -
Trre1g04510 316 FunFam NAD+ transporter 112 306 - -
Trre1g04510 316 Gene3D Mitochondrial carrier domain 112 308 IPR023395 -
Trre1g04510 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 105 IPR018108 -
Trre1g04510 316 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 16 304 IPR044712 GO:0006862|GO:0055085
Trre1g04510 316 SUPERFAMILY Mitochondrial carrier 15 298 IPR023395 -
Trre1g04510 316 Gene3D Mitochondrial carrier domain 2 111 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04510 Trre-Chr1 51000530 51008475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04510 1 310 Chloroplast and Mitochondria Gene Families AT2G47490 73.871 5.72e-159 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04510 K15115 - zju:107426265 512.686