Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04440 ATGCAGAATGCCTTTCAACTTGCATTTTTTTCTTGGAGTACATATGAATTCTCTCTAACATCTTGCTTCCACAAAACAACTGCAGACACTATCATTAGAGTCACACTAGGGGTTGTAATACAAATTCTGTGTAGCTATGTGACTTTGCCTCTTTATGCACTAGTCACACCGATGGGTTCAACCATGAGACCTACCGTTTTCAAAAATGAAGGATTTGCACCTGCACTTAAGAGCTGGCACCACACGGCCAAAAAGCGTGTAAAACACAACAGGCATTCAAACAACAGTACACCAGTCACCAGCAGGCCATCAAGCCCAACACATGGCATGTCACCTGTTCATCTGCTCCATAGACACACAACCGGCAACAGTGACAGTTTACAAACTTCTCCAAGGGCTTCTAACTATGAAAATGAACGGTTGGATGTTGAAGGAGGATCAACTTCCCCAAGAAACAACCATACAGGAGCACATGAGATCCAGATGCCAGTTATCGAGTCATTTTCGACAACAGAGCTTCCGGTTACCACTAGACATGAAGCCAGCATTGGTTCAAAAGATTTTTCTTTTGCAAAGCGACAGCTCGGTTAA 591 0.4349 MQNAFQLAFFSWSTYEFSLTSCFHKTTADTIIRVTLGVVIQILCSYVTLPLYALVTPMGSTMRPTVFKNEGFAPALKSWHHTAKKRVKHNRHSNNSTPVTSRPSSPTHGMSPVHLLHRHTTGNSDSLQTSPRASNYENERLDVEGGSTSPRNNHTGAHEIQMPVIESFSTTELPVTTRHEASIGSKDFSFAKRQLG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04440 196 MobiDBLite consensus disorder prediction 93 108 - -
Trre1g04440 196 MobiDBLite consensus disorder prediction 117 156 - -
Trre1g04440 196 Pfam Mlo family 2 119 IPR004326 GO:0006952|GO:0016020
Trre1g04440 196 MobiDBLite consensus disorder prediction 83 158 - -
Trre1g04440 196 PANTHER MLO-LIKE PROTEIN 1 2 138 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04440 Trre-Chr1 50347168 50348659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04440 3 192 MLO family AT1G11310 52.792 2.23e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04440 K08472 - gmx:100819749 243.047