Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04411 ATGCCTTTCTTTGATTTTTCTGTAGTGGAAAAGGTTTCTGTAGATGTTTTTAAGCAGAAATTTCTATCAATGATAGTTGACCACAGGAAAAAAGTTGTAATTTTCAGCAAGAAGGAAAGAAGTCTTGAGGCTGATGACTTGAGGGATCACTTGGCCGGTTTTGCTAAACAATTGAATAAGGCAAGACAAATGATATTTCCTCCTAATAGGAATCAATCAAAACTTGAACTATTGCTCCCATGTTTGTTAGAGGTTGTGGCCAAAGATCACAAGATGATGCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAACAACAACGTCTTGAAATGCAACAAGAGACAGAAAAGATTGCTGAAGAGGCAGCAGAACAAACGCATCTTGCTGAACAAAGAGAGAAGAGGCTGCTCTGCTTATCGAAGCGGCATATCAACAACAAGAGGTTGATTGGCGCAAGCAATGCCATGCTGAAGACCTCAATGAGAAGCAGCGGCTCAGTCGTATGGCTGGGAAATAAAGAGATATATAAAGAGAAAATTGTCAATCATCGGCAAGTAGAATTGAACCGATTGATTATAGAAAGTGAGGAAAGAAAATCTAAGACTTTACAGTCCAGGAAACAAGAGAGGGGAAGAACGAGAAAACCGAAGTATTATCTTCAGTTGGAAGAAGAGAGACTACACAAATTGCATGAGGAGGAAGAAGCTCCGAAGCTTGAAGAGGATGAGAGAATAAAGAAGGAAGAGACTGAAGGCTTAGCAAAGTTGAATGAGAGTTATGAGAAGCAGAGGTAA 804 0.3943 MPFFDFSVVEKVSVDVFKQKFLSMIVDHRKKVVIFSKKERSLEADDLRDHLAGFAKQLNKARQMIFPPNRNQSKLELLLPCLLEVVAKDHKMMLARKSIIEKRKEEQEQQRLEMQQETEKIAEEAAEQTHLAEQREKRLLCLSKRHINNKRLIGASNAMLKTSMRSSGSVVWLGNKEIYKEKIVNHRQVELNRLIIESEERKSKTLQSRKQERGRTRKPKYYLQLEEERLHKLHEEEEAPKLEEDERIKKEETEGLAKLNESYEKQR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04411 267 Coils Coil 95 127 - -
Trre1g04411 267 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 173 267 IPR027512 GO:0005852
Trre1g04411 267 MobiDBLite consensus disorder prediction 201 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04411 Trre-Chr1 50100076 50102075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04411 94 267 Eukaryotic Initiation Factors Gene Family AT4G11420 39.394 1.66e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04411 K03254 - gmx:100803796 148.288