Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04345 ATGAAGTTGCTGATTTTGTTTGCAGCTCAATTTGCATTCTTAGTTTCTGGGTTTATCTCCTTTGAATCTGAGACACTATTTTCTTTCTCACAAAATGATGTTGTTTCAGCTAATCAATTGGAACCTCTTATGGTTAACCTCACTCTCATTCAAGGAGCTGATTCCAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTTCAACTAGTTGGCTTATTCACCTGGAGGGAGGAGGATGGTGTAACACTCTCAGAAACTGTGTCTACAGAAAAAAGACTCCTCGTGGTTCCTCAATATACATGGAAAATCGAATACCATTCACAGGAATATTGAGCAATAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGCGATGGAGCATCTTTTAGTGGAGATAGTGAAAACGAGGCTGCGAGGCTTCAATTCCGTGGACAAAGAATATGGCTAGCTGCAATGGAGGAATTAATGTCTCAAGGAATGCAGAATGCAGAACAGGCCCTTCTCTCCGGATGCTCCGCGGGTGGTCTAGCATCCATAATACATTGTGATGAGTTCCAGAGCTTGTTACCAAAACCTTCCAAAGTGAAGTGTATTAGTGATGCAGGATTTTTTCTCGATGCAATTGATGTATCTGGAGGACGGTCACTGAGGGATCTGTTTGGAGGCGTTGTTCAGTTACAGGAAGTTCACAAAAATTTGCCGAAAAATTGTATAAGCCGACTGGACCCTACTTCGTGCTTCTTTCCTCAAAATTTGGTAGAACATGTGGAGACACCACTGTTTCTACTCAACGCGGCTTATGATGTGTGGCAGGTCCGATCGAGTTTAGCCCCGGCCACGGCTGATCCCCTTGGCACTTGGAATGACTGCAAATCAAACCATGCAGAGTGTAACTCGTCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTTGACGACGTGAAAGACTTCTCAAAGTCGTCTCAAACTGGACTATTCATAAATTCTTGTTTTTCTCATTGCCAGTCTGAGAGACATGAGTTATGGTTCGCCGATAACTCTCCTCTTATCGATGACAAGCCAATTGCAGTTGCAGTTGGAGACTGGTTTTTCGATCGAGAAGTTGTCAAAGCTATTGACTGTCCTTACCCTTGTGACAACAGCTGCCATAATCTGGTGTTTAAATGA 1227 0.4279 MKLLILFAAQFAFLVSGFISFESETLFSFSQNDVVSANQLEPLMVNLTLIQGADSKGAVCLDGTLPGYHLDRGFGSGSTSWLIHLEGGGWCNTLRNCVYRKKTPRGSSIYMENRIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSENEAARLQFRGQRIWLAAMEELMSQGMQNAEQALLSGCSAGGLASIIHCDEFQSLLPKPSKVKCISDAGFFLDAIDVSGGRSLRDLFGGVVQLQEVHKNLPKNCISRLDPTSCFFPQNLVEHVETPLFLLNAAYDVWQVRSSLAPATADPLGTWNDCKSNHAECNSSQIQFLQDFRNQMLDDVKDFSKSSQTGLFINSCFSHCQSERHELWFADNSPLIDDKPIAVAVGDWFFDREVVKAIDCPYPCDNSCHNLVFK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04345 408 PANTHER NOTUM-RELATED 41 404 IPR004963 GO:0016787
Trre1g04345 408 Pfam Pectinacetylesterase 41 388 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04345 Trre-Chr1 49158894 49162354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04345 4 408 Carbohydrate Esterase AT1G57590 64.878 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04345 K19882 - gmx:100786972 702.59