Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04125 ATGTTGTCCTTAAAGGGAAGTCTGAATGGGGTCCTTCAACAGTCACATGTTCATTGGGACAAAGTAAGAGCTGCACCAAATCGTACAATGGTTTGGGACAAACTAAGATCAAGCTCATTTGAGTTGGATGAGGAAATGATTGAGTCACTTTTTGGCTATAATTTACAAAGTTCAATTAATAATAATGATGAAAGTAAGAGCAAAACACCATCTCCGGAGAACATAACAATACTATCAAAAGCTTTGAATGTGACAGCTGAACAAGTATGTGATGCACTAATGCAAGGGAAGGGATTGTCTTTGCAACAATTAGAGGCACTAGTGAAAATGGTACCTACCAAAGAAGAAGAGGCTAAACTCTTCAATTATAAAGGCAACATCAATGAATTGGGGTCCGCAGAAAGGTTTGTGAGAGCAGTGCTTAGTGTACCATTTGCTTTTCAAAGAGTAGAAACCATGCTTTACAAAGAGACTTTTGATGATGAAGTTGTTCACCTAAGGAACTCTTTTTCAGTGCTTGAGGAGGCATGCAAGGAGCTAAGATCAAGCAGACTCTTCTTGAAACTACTAGAAGCAGTACTGAAAACAGGAAACCGAATGAACGTCGGAACAATAAGAGGAGGTGCAAGAGCATTCAAACTGGATGCTCTACTGAAGCTAGCAGATGTTAAAGGAACAGATGGAAAAACAACCTTACTCCATTTTGTTGTTCAAGAAATTGTCCGTTCAGAAGGAATAAGAGTTTCAGATAGCATGATGGGAAAAATAAGCCAAAAAAGTAACAAAAATTTATTTCCAACACCTTCATTATGCTAA 816 0.3811 MLSLKGSLNGVLQQSHVHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQSSINNNDESKSKTPSPENITILSKALNVTAEQVCDALMQGKGLSLQQLEALVKMVPTKEEEAKLFNYKGNINELGSAERFVRAVLSVPFAFQRVETMLYKETFDDEVVHLRNSFSVLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSMMGKISQKSNKNLFPTPSLC 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04125 271 PANTHER FORMIN-RELATED 17 257 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre1g04125 271 Pfam Formin Homology 2 Domain 16 242 IPR015425 -
Trre1g04125 271 SMART it6_source 8 270 IPR015425 -
Trre1g04125 271 SUPERFAMILY Formin homology 2 domain (FH2 domain) 18 244 - -
Trre1g04125 271 Gene3D Formin, FH2 domain 12 255 IPR042201 -
Trre1g04125 271 ProSiteProfiles Formin homology-2 (FH2) domain profile. 4 271 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04125 Trre-Chr1 46385947 46390128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04125 17 266 FH2 protein (formin) Gene Family AT3G05470 77.395 7.17e-138 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04125 - - gmx:100793761 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04125 1 46385947 46390128 Trre1g04125 1 46385947 46390128 ECH