Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04124 ATGGTTTGGGACAAACTAAGATCAAGCTCATTTGAGTTGGATGAGGAAATGATTGAGTCACTTTTTGGCTATAATTTACAAAGTTCAATTAATAATAATGATGAAAGTAAGAGCAAAACACCATCTCCGGAGAACATAACAATACTATCAAAAGCTTTGAATGTGACAGCTGAACAAGTATGTGATGCACTAATGCAAGGGAAGGGATTGTCTTTGCAACAATTAGAGGCACTAGTGAAAATGGTACCTACCAAAGAAGAAGAGGCTAAACTCTTCAATTATAAAGGCAACATCAATGAATTGGGGTCCGCAGAAAGGTTTGTGAGAGCAGTGCTTAGTGTACCATTTGCTTTTCAAAGAGTAGAAACCATGCTTTACAAAGAGACTTTTGATGATGAAGTTGTTCACCTAAGGAACTCTTTTTCAGTGCTTGAGGAGGCATGCAAGGAGCTAAGATCAAGCAGACTCTTCTTGAAACTACTAGAAGCAGTACTGAAAACAGGAAACCGAATGAACGTCGGAACAATAAGAGGAGGTGCAAGAGCATTCAAACTGGATGCTCTACTGAAGCTAGCAGATGTTAAAGGAACAGATGGAAAAACAACCTTACTCCATTTTGTTGTTCAAGAAATTGTCCGTTCAGAAGGAATAAGAGTTTCAGATAGCATGATGGGAAAAATAAGCCAAAAAAGGAAGTCTGAATGGGGTGTAAGTAATTTTGTTAATGCTCAAGCTAAGAATAATGATTCTAGTTTGTGGAGATGCTAG 768 0.3789 MVWDKLRSSSFELDEEMIESLFGYNLQSSINNNDESKSKTPSPENITILSKALNVTAEQVCDALMQGKGLSLQQLEALVKMVPTKEEEAKLFNYKGNINELGSAERFVRAVLSVPFAFQRVETMLYKETFDDEVVHLRNSFSVLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSMMGKISQKRKSEWGVSNFVNAQAKNNDSSLWRC 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04124 255 Gene3D Formin, FH2 domain 1 238 IPR042201 -
Trre1g04124 255 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 255 IPR015425 -
Trre1g04124 255 Pfam Formin Homology 2 Domain 1 213 IPR015425 -
Trre1g04124 255 SMART it6_source 1 254 IPR015425 -
Trre1g04124 255 PANTHER FORMIN-RELATED 1 228 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre1g04124 255 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04124 Trre-Chr1 46384797 46389593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04124 1 231 FH2 protein (formin) Gene Family AT3G05470 77.593 4.77e-126 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04124 - - gmx:100793761 388.267