Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04077 ATGGTTACCTTAATTATGCTCCTATTTACCATTTTTTTGGTTGTATGCTTGATCCGTCGCCAAAAATCTTCCAGCAAAAATGGGATTTGCAAAGATGATTGTGAGAGTAGAGTGCTTCATGACACAAGCAGGAGGCACATGGCTTCAACAATCATGTCCTTTGATTCTAGCCCAGATGTTAAAGGGGGGTGTCTTTATGGGGGAAATTTGAGCAAGACACCAACAACACCTAAATTTAGAGGAGTGCAAGTTTTCACATATAGGGAGCTAGAAGTTGCTACGAATGGATTCAATGAAGCAAATGTGATTAATAATGGAGGAGTTAATGGTTTGATATATAAGGGAGTCTTAAATGATGGAACTTTGGCAGCAATTAAGTTACTTCACAGTGAGGGTAAGCAAGGAGAGCGTGCCTTCAGAATAGAGGTTGATCTCCTAAGCCAATTGCGCTCTCCATATTTGGTGGAATTACTTGGCTATTGTGCTGATCAACACCACAGGTTATTGATTTTTGAATACATGCCTAATGGTACACTCCAACACCATCTACATTCCCCTAACGATCAAACACAACCATTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCCTTGGAGTTCCTGCATGAACATTCTATCTCACCCGTGATCCACAGAGACTTCAAGAGCTATAATGTTCTACTGGATCAGAATTTCCGTGCAAAGGTGTCAGATTTTGGATTGGCTAAGATGGGATCAGAGAAGAGAAATGGCCAAGTTTCTACCCGTGTGCTTGGGACCACTGGATATTTGGCACCAGAGTACGCCTCCACGGGTAAGCTTACTACAAAGTCAGATGTTTACAGCTACGGTGTAGTTCTTCTCGAATTGCTGACAGGACGTGTACCAGTTGACATTAAGCGGCCCACAGGAGAACATGTCCTTGTGTCTTGGGCTCTTCCAAGGTTGACAAACAGAGAAAAAGTTGTGGAAATGGTTGACCCAGTTCTACACGGACAGTACTCAAAGAAAGCTTTAGTTCAGGTAGCTGCCATCGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAATCATTGATACCACTTGTGAGGACCCATTCTCTTTCCAGTTCCCTAAGATTTCAGAAACAAATACCAAGTTAA 1179 0.4343 MVTLIMLLFTIFLVVCLIRRQKSSSKNGICKDDCESRVLHDTSRRHMASTIMSFDSSPDVKGGCLYGGNLSKTPTTPKFRGVQVFTYRELEVATNGFNEANVINNGGVNGLIYKGVLNDGTLAAIKLLHSEGKQGERAFRIEVDLLSQLRSPYLVELLGYCADQHHRLLIFEYMPNGTLQHHLHSPNDQTQPLDWWARMRIALDCARALEFLHEHSISPVIHRDFKSYNVLLDQNFRAKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPTGEHVLVSWALPRLTNREKVVEMVDPVLHGQYSKKALVQVAAIAAMCIQPEADYRPLMTDVVQSLIPLVRTHSLSSSLRFQKQIPS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04077 392 Pfam Protein tyrosine and serine/threonine kinase 107 371 IPR001245 GO:0004672|GO:0006468
Trre1g04077 392 PANTHER OS07G0668900 PROTEIN 78 378 - -
Trre1g04077 392 SUPERFAMILY Protein kinase-like (PK-like) 74 371 IPR011009 -
Trre1g04077 392 Gene3D Transferase(Phosphotransferase) domain 1 174 387 - -
Trre1g04077 392 Gene3D Phosphorylase Kinase; domain 1 70 173 - -
Trre1g04077 392 FunFam Receptor-like serine/threonine-protein kinase ALE2 174 388 - -
Trre1g04077 392 CDD STKc_IRAK 107 374 - -
Trre1g04077 392 ProSiteProfiles Protein kinase domain profile. 97 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g04077 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04077 Trre-Chr1 45849339 45852167 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04077 8 384 Receptor kinase-like Gene Family AT3G58690 58.005 6.15e-150 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre1g04077 PK_Tyr_Ser-Thr 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04077 - - gmx:100809810 613.994