Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04064 ATGTTATATAACCAAAACATGTCTGTTTTTGAAGGGATTGGTTTGTTGGTCGATGTTGATGGTGGAACTGGAAACACAGGTAAGATTATATGTGAGAAATTTCTAGAGCTCAAGTACATTGTTTTGGACCTTCCACAGGTTGTTTCGGGTTTAGCAGGAAGCAATAATAACTTGAGTTTTGTTGGGGGGAACATGTTTAAGTCTATCCCTCAAGCTGATGCTGTTTTGCTCAAGTGGGTGTTACACAATTGGAGTGATCATGATTGCATAAAGATACTAAAAAATTGCAAGAATGCTATATCAGGAAAAGGGAAAGTGATAATCATAGATGTAGTAATAAATGAAAAACAAGATGAGCATGAAATGACAGAAGTAAAACTTTTACTTGATGTTATTATGATGACCAGTCTCAATGGAAAAGAGAGAAATGAAAAGGAATGGAAACAACTTTTCTTACAAGCTGGCTTCAAATCTTACAAGATATTCCCCGCATTTGGTTTTAGATCTCTAATTGAGCTTTATCCTTAA 528 0.3504 MLYNQNMSVFEGIGLLVDVDGGTGNTGKIICEKFLELKYIVLDLPQVVSGLAGSNNNLSFVGGNMFKSIPQADAVLLKWVLHNWSDHDCIKILKNCKNAISGKGKVIIIDVVINEKQDEHEMTEVKLLLDVIMMTSLNGKERNEKEWKQLFLQAGFKSYKIFPAFGFRSLIELYP 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04064 175 Pfam O-methyltransferase domain 9 157 IPR001077 GO:0008171
Trre1g04064 175 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 175 IPR016461 GO:0008168
Trre1g04064 175 PANTHER O-METHYLTRANSFERASE 9 160 IPR016461 GO:0008168
Trre1g04064 175 Gene3D Vaccinia Virus protein VP39 2 175 IPR029063 -
Trre1g04064 175 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 173 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04064 Trre-Chr1 45749844 45752392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04064 10 173 Monolignol Biosynthesis Gene Families AT5G54160 43.976 9.57e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04064 K22588 - gmx:100819853 233.032