Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04037 ATGGCTCACAAAAAAGAGCAAATTGCAGAATTTTTTGCTTCTCCATTTTGTCTATCTTTTTTCTTCCTTGTAAGTGTGTTATTCATGTTTAAGCTTGCAATTATAAAACCCAAATCCAAAGCCAATCTAAATCAGCTTCCATCTCCACCAAAATTACCAATCATTGGTAATCTTCATCAGCTAGGGACACTTCCACACCGTTCACTTAGAGACCTATCACTCAAATATGGCAACATGATGTTGTTGCAATTGGGACAAAGACAAACTCTAGTGATTTCATCAGCAGATGTAGTCATGGAAATAATGAAAACTCATGATCTAGCCTTTTCAAACCGACCCCAAAATATAGCGTGTAAAATTTTGTTGTACTGTTGTAAAGATATTGTTTTTGGACATTATGGAGAAAATTGGAGACAAAAAAGAAAAATAAGTGTTGTAGAACTGTTGAGCATGAAATGTGTACAATCATTTGGTCAAAATAGAAAAGAAGAAGTTGAAGAATTGGTGAATAAGATACGTGAAATTAGCTCAAATGATGCATGTGTTAATTTAAGTGAGATGCTTAATTCAACAATAAACAATATTGTTTGTAAATGTGCTATTGGTAAAAAGTATGAAGACAACAACGTGAAAGAGTTATCAAGGAAGATTTTGTTTCATATTTCAGAATTTGTTGTTGGAGATTACTTTCCTTTGTTGGGTTGGGTTGATATTCTTAGTGGAAAAATTGGAAAATTCAAGGAAACTTTTCAAGAACTAAATGATTTGTTTGATAAGGTGATTGAAGAGTGTTTGGCAGTAAAGAAGATAGAAAATGAAGAATTTAAAAAGAAAGGGTTTGTTGATATTCTCCTTCAACTAAGAGAGAATACCATGCTTGAGTTTGAGCTCTCCAATAATGATATTAAAGCAATTATAACGGACATGTTTGTGGGAGGAACTGACACAACCACAACAACATTAGAATGGTCATTTTCAGAGCTCATGAGACATCCAATCATAATGAAGAAAACACAAGAAGTAAGATGTGTTTTAGGCCATAAATTACAAGTAGAAGAAAGTGACATCAATCAAATGCACTATTTAAAGCGTGTAGTGAAAGAAACTCTCAGATTACATCCTCCCGGTCCTCTTTTGGTTCCTCGAGAAACAATATCTAATGTAAAACTGAAAGGGTACGACATTCCTGCAAAAACAATGGTATATGTAAACACATGGGCAATACAAAGGGACCCTAAAATCTGGGAAAGTCCTGAAGTGTTTATGCCAGATAGATTTCAACACAACCAAGTTGACTTTAAAGGTCAAGATTTTCAGTTTATCCCATTTGGTTTTGGGAGAAGGGGATGTCCTGGATATAATTTTGGGATAGCTATTGTTGAATATGTGCTTCTTAGCCTTCTCTATTGGTTTGATTGGAAGCTACCTGAAACAAGTTCAAGTATGCAACATATAGATATGAGCGAGGTATTCGCTCTTGCTCTCACGAAGAAAGAACCACTTCTTTTAGAACCAATAGCATTTTCGTTTTAA 1533 0.3438 MAHKKEQIAEFFASPFCLSFFFLVSVLFMFKLAIIKPKSKANLNQLPSPPKLPIIGNLHQLGTLPHRSLRDLSLKYGNMMLLQLGQRQTLVISSADVVMEIMKTHDLAFSNRPQNIACKILLYCCKDIVFGHYGENWRQKRKISVVELLSMKCVQSFGQNRKEEVEELVNKIREISSNDACVNLSEMLNSTINNIVCKCAIGKKYEDNNVKELSRKILFHISEFVVGDYFPLLGWVDILSGKIGKFKETFQELNDLFDKVIEECLAVKKIENEEFKKKGFVDILLQLRENTMLEFELSNNDIKAIITDMFVGGTDTTTTTLEWSFSELMRHPIIMKKTQEVRCVLGHKLQVEESDINQMHYLKRVVKETLRLHPPGPLLVPRETISNVKLKGYDIPAKTMVYVNTWAIQRDPKIWESPEVFMPDRFQHNQVDFKGQDFQFIPFGFGRRGCPGYNFGIAIVEYVLLSLLYWFDWKLPETSSSMQHIDMSEVFALALTKKEPLLLEPIAFSF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04037 510 FunFam Cytochrome P450 83B1 33 504 - -
Trre1g04037 510 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 Gene3D Cytochrome P450 35 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 Pfam Cytochrome P450 47 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 CDD CYP71-like 75 501 - -
Trre1g04037 510 SUPERFAMILY Cytochrome P450 47 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g04037 510 PANTHER CYTOCHROME P450 71B11-RELATED 28 505 - -
Trre1g04037 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04037 Trre-Chr1 45303215 45305611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04037 22 501 Cytochrome P450 AT3G48280 41.615 3.20e-129 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04037 K20617 - gmx:100803384 632.869