Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04026 ATGGCTGGTAGTAACCAACAACTCAACCCCAACGATTCCAAGATGGTGGTTCCGTTGAACATGTGGGTTTTGATCTCTAATTTTAAGTTAGCATACAATCTTCTTCGTCGTCCTGATGGGACATTCAACCGTGACTTGGCAGAGTTTCTTGATCGAAAAGTTCCGGCGAATGCCAACCCCGTGGATGGAGTTTTCTCATTTGATGTCATTGTTGACAGGGAAACTAATCTCCTTACTCGAATCTACCGTCCTGTTGAGGGAGATGAAAATCATGTGAACATTGTTGATCTTGAGAAGCCTATTACCACTGAGGTTCTTCCTGTCCTCATGTTCTTCCATGGTGGAAGTTTTGCACATTCTTCGGCTAATAGTGCTATATATGATACCTTGTGTCGTCGATTGGTTGGTATTTGTAATGCCGTTGTTGTCTCTGTGAATTATAGGCGTGCGCCTGAAAATAGGTATCCTTGTGCTTATGAAGATGGTTGGAAAGCTCTTGAATGGGTTAGTTCTAGAGCTTGGCTACAGAGCAAAAAGGATAACAAGGTTCACATCTACATGGTTGGTGATAGCTCAGGCGGGAACATTGTGCACCATGTTGCCTTGAAAGCTTTGGATTCTGGAATTCAGGTTTTGGGGAATATACTGCTCAATCCATTGTTTGGTGGGAAAGAAAGAACAGAATCTGAAAAGCGTCTCGACGGGAGGTATTTTGTTAGAGTTAAAGATAGAGACTGGTATTGGAGAGCTTTTCTTCCCGAAGGGGAAGACAGAGATCATCACGCGTGTAACCCTTTTGGTCCCAAGGGACGAACCCTTGAAGAGGTTACCTTTCCTAAGAGTCTTGTCGTGGTTGCTGGTTTGGATCTTGTTCAGGATTGGCAATTGGGTTATGCCAAAGGGCTTGAGAAAGCTGGTCAAAATGTGAAGTTGCTATTTCTGGAGCAAGCCACGATTGGATTTTACCTTCTTCCAAATAATGAGCATTTCTCTCTTGTCATGGATGAGATAAAACAATTTGTCAACTCTAACTGTTCATAG 1041 0.4304 MAGSNQQLNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPVEGDENHVNIVDLEKPITTEVLPVLMFFHGGSFAHSSANSAIYDTLCRRLVGICNAVVVSVNYRRAPENRYPCAYEDGWKALEWVSSRAWLQSKKDNKVHIYMVGDSSGGNIVHHVALKALDSGIQVLGNILLNPLFGGKERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHHACNPFGPKGRTLEEVTFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQNVKLLFLEQATIGFYLLPNNEHFSLVMDEIKQFVNSNCS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04026 346 FunFam Gibberellin receptor GID1 1 343 - -
Trre1g04026 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 109 125 IPR002168 GO:0016787
Trre1g04026 346 SUPERFAMILY alpha/beta-Hydrolases 34 342 IPR029058 -
Trre1g04026 346 Gene3D alpha/beta hydrolase 1 343 IPR029058 -
Trre1g04026 346 PANTHER ARYLACETAMIDE DEACETYLASE 44 316 - -
Trre1g04026 346 Pfam alpha/beta hydrolase fold 109 322 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04026 Trre-Chr1 45221570 45223211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04026 1 345 Carbohydrate Esterase AT3G05120 73.699 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04026 K14493 - gmx:100815161 644.425