Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03978 ATGAATTACACCATTCAGGCCGAAGCCAATAAAGCTGCTGCAAAGTATGATAATGCCTCTATTGACTCAAAGATTGAGTTTTACAAGGAGGGATTGACCCCATATACAGAGGCTAAGCTTCCTCTTATAAGTGATGTTCCTGAAGGATGTGTAATATTGAGAGAGCATGTTCCTATTAGCAATCTCTTTACTTGTCTTTGGTTCAATGAAGCGCAACTTTGTAGTTCAGATTTAGATTTGTCTTCAAGCTTTGTTCAATCCCTAAAGATTCGTCCTCAAGCTTCAGACTCATTTTTATCTTCAAGCTTCAGATTCCTTCAAATATTCAGCTTCAGCTTCGTAACACGTTTGAAATGTGGTGGTTTCATCTTTGCTCTTCGATTTAACCACGCTATGGTAGATGGAGTTGGCACAATTCATTTCATGTTAGCGGTGACAGGAATAGCTAAGGGAGCAAAACAACCTCCAATTCAACCCTCATGGAACAGAGAGCGTCTAAGGGCAAGGGAACAAGCATGCGTCACACTCAACCACCGCGAATACGAACAATTATCTGACATTCAATCTGACACAATTTTAACTGCAACAGAATTTTCAGAACAATCTTTTTTCTTCGGCCCTACTGAAATAGCCGCAATTCGAAGCTTACTTCCACAAGATCTCGATAGCAAGTCAACCACCTTCGAAGTCCTTACATCGTACATTTGGCGTTGCCGCACGAAAGTGTTGCAGCCGAATCCAAACGAAGAGGTTCGAATGATGTGCATTGTGGACGCACGTGATAAATTCGACCCTCCAATTCCATTTGGTTACTATGGAAATTGTTTTGCTTTCCCTGCGGCTGTTACAACCGCAGGGGAGCTTTGTGAAAAGCCGTTAGAGTTTGCTTTGGAATTGATAAAAAAAGCGCGCGATGAAGTGAGTGAGGAATATATGCATTCTGTGGCGGATCTAATGGTGACTAAAGGAAAGCCATTGTTTACTATAGTGAGGTCTTGTCTTGTGTTGGATACCACATATGCTGGACTTAGAAATTTGGATTTTGGATGGGGGAAGGCAGTGTATGGTGGAATGGCTAAACCTGGGGCTGGGACTTTTCCTTCAGTGCATTTTCATGTTCCGGGTCAAAATGCAAAAGGGAAGGAAGGTATATTTGTTTTGATATCATTGCCTACTAAATTTATGTCAGCTTTTGCCAAAGAGTTGGATGATTTGATTGCTTGA 1224 0.4158 MNYTIQAEANKAAAKYDNASIDSKIEFYKEGLTPYTEAKLPLISDVPEGCVILREHVPISNLFTCLWFNEAQLCSSDLDLSSSFVQSLKIRPQASDSFLSSSFRFLQIFSFSFVTRLKCGGFIFALRFNHAMVDGVGTIHFMLAVTGIAKGAKQPPIQPSWNRERLRAREQACVTLNHREYEQLSDIQSDTILTATEFSEQSFFFGPTEIAAIRSLLPQDLDSKSTTFEVLTSYIWRCRTKVLQPNPNEEVRMMCIVDARDKFDPPIPFGYYGNCFAFPAAVTTAGELCEKPLEFALELIKKARDEVSEEYMHSVADLMVTKGKPLFTIVRSCLVLDTTYAGLRNLDFGWGKAVYGGMAKPGAGTFPSVHFHVPGQNAKGKEGIFVLISLPTKFMSAFAKELDDLIA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03978 407 Gene3D - 182 402 IPR023213 -
Trre1g03978 407 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 109 402 - -
Trre1g03978 407 Gene3D - 50 181 IPR023213 -
Trre1g03978 407 Pfam Protein of unknown function (DUF616) 6 92 IPR006852 -
Trre1g03978 407 Pfam Transferase family 114 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03978 Trre-Chr1 44628185 44633206 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03978 76 402 Monolignol Biosynthesis Gene Families AT5G48930 25.439 5.13e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03978 K19861 - gmx:100820325 433.721