Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03975 ATGGCCTTTTCTCAACAAGTTCAATTCTCATCTCCTATTGTTTTTCCCGTTCGAAGGCGTCAACCGGAGCTCATTGCTCCGGTTACACCCACACCCCACGAAACAAAGCTACTATCCGACATAGATGAACAAGCTGGTCTTCGCGCCAATATACCAATCATACAATTCTATCGTAACGAGCCATCAATGGCGGGAAAAGACCCGGTTGAAGTCATAAGAAATGCAATTGCAGAAGCACTTGTGTTTTACTATCCACTTGCTGGAAGACTTAAGGAAGCTGAGGATGCTGGTGGTAAACTTGTGGTGGATTGTAATGAAGAAGGTGTGATGTTCATTGAGGCTGATGCTGATGTTACACTTGAACAATTTGGTGAAATTAAACCACCTTTTCCATGCTTCCAAGAACTTCTTTATGATGCTGCGGTTCCTGAGGGAGTTCTTAATACTCCCATCCTACTTATACAGGCGTACCCTCACTCTCCAGTCTCCACGCCTCTGAAACCCTATCTCACTCTCGTGAACACCTCTCATCTCTCTCGTTCCCTCTCTGAAAAGCGAAGCTCGTCTCTCTCTCTTTCTTGTTCCCTCTCTGAAACGCGAAGCTCATCTCTCTCTCTCTCTCTCTCGTTCGCGCGAAACCCTAGCTCACTGAAACGCAAGGGTTTTTATATTTTACTCGACGGAGAGACACAATCGCTATTCTCTGGCACTAATTCTGATTCTGGTGAAGCCTTCCTGTCTCGAATTCAAGGGTTCAATGGTTTAACCTTCCCCTTTCTCAATGTTCTATAG 792 0.4533 MAFSQQVQFSSPIVFPVRRRQPELIAPVTPTPHETKLLSDIDEQAGLRANIPIIQFYRNEPSMAGKDPVEVIRNAIAEALVFYYPLAGRLKEAEDAGGKLVVDCNEEGVMFIEADADVTLEQFGEIKPPFPCFQELLYDAAVPEGVLNTPILLIQAYPHSPVSTPLKPYLTLVNTSHLSRSLSEKRSSSLSLSCSLSETRSSSLSLSLSFARNPSSLKRKGFYILLDGETQSLFSGTNSDSGEAFLSRIQGFNGLTFPFLNVL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03975 263 Pfam Transferase family 17 156 - -
Trre1g03975 263 PANTHER ACYL TRANSFERASE 4 15 139 - -
Trre1g03975 263 Gene3D - 16 163 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03975 Trre-Chr1 44620344 44625035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03975 20 155 Monolignol Biosynthesis Gene Families AT5G48930 32.353 1.69e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03975 K19861 - gmx:100820325 221.476