Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03928 ATGGCTGATTCTTCAACAAACCCAAAGGATCAGCAAAATACACGTCTCTATCATCCTTACCAACACCTCAACATCCCCGTCGATAAACTCTACAACCTCCCCACCTCACCAGAACATCTTTTCCCCGAAGAAGCTTCTAGAAAGCACCGATCATGGGGCGACAATCTCCAGTACTACACCGGCACCGGCTACCTCTCCGGCGCGATCATCGGAGGTGCTAAGGGAACCGTAGAAGGTCTCAAGGCTGCTGAGTCCGGATTGGAGAGTGGTATGATCCACTTTAGAGATACGGATGATTTGGTCAATAGCGCCGTCGCCGGACTTGGTACCGGAGCGCTTTATAAAGCTGCCGCAGGTCCCCGATCGGCTGCTATTGCTGGTGCTATCGGGGGAATTGCGGCAGCTGTTGCAGTTGCCGGGAAACAGGCTTTGAAACGACACATTCCAATATAA 453 0.521 MADSSTNPKDQQNTRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWGDNLQYYTGTGYLSGAIIGGAKGTVEGLKAAESGLESGMIHFRDTDDLVNSAVAGLGTGALYKAAAGPRSAAIAGAIGGIAAAVAVAGKQALKRHIPI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03928 150 PANTHER TIM23 85 138 IPR045238 GO:0022857
Trre1g03928 150 Pfam Tim17/Tim22/Tim23/Pmp24 family 85 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03928 Trre-Chr1 43837782 43838336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03928 1 150 Chloroplast and Mitochondria Gene Families AT3G04800 44.149 7.83e-41 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03928 K17794 - gmx:100803835 203.371